RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 CYFIP1Q7L576 1253 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 PIGWQ7Z7B1 504 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 FAM178BQ8IXR5 827 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 C12orf56Q8IXR9 622 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 SLC5A5Q92911 643 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 UIMC1Q96RL1 719 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 STRA6Q9BX79 667 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 IDI2Q9BXS1 227 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 ROPN1BQ9BZX4 212 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-208ENST00000543633 EHMT1Q9H9B1 1298 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 ROPN1Q9HAT0 212 aaPredicted RBP14.81□□□□□ -0.04
VPS33A-208ENST00000543633 PI4KBQ9UBF8 816 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 RPTORQ8N122 1335 aa14.81□□□□□ -0.04
VPS33A-208ENST00000543633 PMM2O15305 246 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 MAPTP10636 758 aaKnown RBP14.8□□□□□ -0.04
VPS33A-208ENST00000543633 CHN1P15882 459 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 PRELPP51888 382 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 FKBP1AP62942 108 aaKnown RBP14.8□□□□□ -0.04
VPS33A-208ENST00000543633 CETN1Q12798 172 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 TAOK1Q7L7X3 1001 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 CCDC125Q86Z20 511 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 C12orf50Q8NA57 414 aaPredicted RBP14.8□□□□□ -0.04
VPS33A-208ENST00000543633 LMO3Q8TAP4 145 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 ALG3Q92685 438 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 RNF25Q96BH1 459 aaPredicted RBP14.8□□□□□ -0.04
VPS33A-208ENST00000543633 NACC1Q96RE7 527 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 WDR11Q9BZH6 1224 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 ADAM7Q9H2U9 754 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 COG5Q9UP83 839 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 TRPC6Q9Y210 931 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 ALG6Q9Y672 507 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 ZNF536O15090 1300 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 ZNF646O15015 1829 aaPredicted RBP14.8□□□□□ -0.04
VPS33A-208ENST00000543633 F5H6K3 240 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 OPLAHO14841 1288 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 MAPK13O15264 365 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 PPIP5K2O43314 1243 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 MGRN1O60291 552 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 SLITRK3O94933 977 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 KRT13P13646 458 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 GPC5P78333 572 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 PROCA1Q8NCQ7 364 aaPredicted RBP14.8□□□□□ -0.04
VPS33A-208ENST00000543633 FBXO25Q8TCJ0 367 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 TRIM31Q9BZY9 425 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 KCNQ5Q9NR82 932 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 RGL1Q9NZL6 768 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 MTUS1Q9ULD2 1270 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 PCDHA3Q9Y5H8 950 aa14.8□□□□□ -0.04
VPS33A-208ENST00000543633 CFAP73A6NFT4 308 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 PHF20L1A8MW92 1017 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 RTN2O75298 545 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 NDUFB10O96000 172 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 SHBGP04278 402 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 GZMAP12544 262 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 RARGP13631 454 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 PDE6BP35913 854 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 PLTPP55058 493 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 LRCH2Q5VUJ6 765 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 INTS8Q75QN2 995 aaKnown RBP14.79□□□□□ -0.04
VPS33A-208ENST00000543633 SIAH1Q8IUQ4 282 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 PRELID2Q8N945 189 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 SLCO2A1Q92959 643 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 DYDC2Q96IM9 177 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 JPH2Q9BR39 696 aaPredicted RBP14.79□□□□□ -0.04
VPS33A-208ENST00000543633 ZC3H12CQ9C0D7 883 aaKnown RBP14.79□□□□□ -0.04
VPS33A-208ENST00000543633 GOPCQ9HD26 462 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 SAMD15Q9P1V8 674 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 MCM8Q9UJA3 840 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 SLC12A4Q9UP95 1085 aa14.79□□□□□ -0.04
VPS33A-208ENST00000543633 SLX4Q8IY92 1834 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 BMP3P12645 472 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 CRKP46108 304 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 RPL21P46778 160 aaKnown RBP14.78□□□□□ -0.04
VPS33A-208ENST00000543633 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-208ENST00000543633 SNRPFP62306 86 aaKnown RBP14.78□□□□□ -0.04
VPS33A-208ENST00000543633 NFIAQ12857 509 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 SPRED3Q2MJR0 410 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 TRMT10CQ7L0Y3 403 aaKnown RBP14.78□□□□□ -0.04
VPS33A-208ENST00000543633 GLG1Q92896 1179 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 INTS9Q9NV88 658 aaKnown RBP14.78□□□□□ -0.04
VPS33A-208ENST00000543633 HAUS2Q9NVX0 235 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 CTTNBP2NLQ9P2B4 639 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 SNX24Q9Y343 169 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 PASKQ96RG2 1323 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 NPR1P16066 1061 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 PEX5P50542 639 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 CYP2J2P51589 502 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 USH1GQ495M9 461 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 ZC2HC1CQ53FD0 456 aaPredicted RBP14.78□□□□□ -0.04
VPS33A-208ENST00000543633 PHLDB3Q6NSJ2 640 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 CD101Q93033 1021 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 ART4Q93070 314 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 SELENOSQ9BQE4 189 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 CXorf56Q9H5V9 222 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 CD248Q9HCU0 757 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 TAS2R14Q9NYV8 317 aa14.78□□□□□ -0.04
VPS33A-208ENST00000543633 RIPK2O43353 540 aa14.77□□□□□ -0.04
VPS33A-208ENST00000543633 EXOC3O60645 756 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms