RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 SLC7A3Q8WY07 619 aa17.33■□□□□ 0.36
CSF1R-209ENST00000543093 VN1R3Q9BXE9 311 aa17.33■□□□□ 0.36
CSF1R-209ENST00000543093 SMOC2Q9H3U7 446 aa17.33■□□□□ 0.36
CSF1R-209ENST00000543093 DBR1Q9UK59 544 aaKnown RBP17.33■□□□□ 0.36
CSF1R-209ENST00000543093 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
CSF1R-209ENST00000543093 ASGR2P07307 311 aa17.32■□□□□ 0.36
CSF1R-209ENST00000543093 AGMOQ6ZNB7 445 aa17.32■□□□□ 0.36
CSF1R-209ENST00000543093 NSUN7Q8NE18 718 aaKnown RBP17.32■□□□□ 0.36
CSF1R-209ENST00000543093 TMEM143Q96AN5 459 aa17.32■□□□□ 0.36
CSF1R-209ENST00000543093 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
CSF1R-209ENST00000543093 KCNMB3Q9NPA1 279 aa17.32■□□□□ 0.36
CSF1R-209ENST00000543093 BMP2KQ9NSY1 1161 aaPredicted RBP17.32■□□□□ 0.36
CSF1R-209ENST00000543093 WRAP73Q9P2S5 460 aaPredicted RBP17.32■□□□□ 0.36
CSF1R-209ENST00000543093 DTNBO60941 627 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 SSBP05455 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
CSF1R-209ENST00000543093 SRGAP2CP0DJJ0 459 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 PTPN14Q15678 1187 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 TMC5Q6UXY8 1006 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 NEK8Q86SG6 692 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 CABP7Q86V35 215 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 ZDHHC14Q8IZN3 488 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 FEZF2Q8TBJ5 459 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 PRPF31Q8WWY3 499 aaKnown RBP17.31■□□□□ 0.36
CSF1R-209ENST00000543093 PSPC1Q8WXF1 523 aaKnown RBP17.31■□□□□ 0.36
CSF1R-209ENST00000543093 ATOH1Q92858 354 aaPredicted RBP17.31■□□□□ 0.36
CSF1R-209ENST00000543093 FAM20AQ96MK3 541 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 IRF2BPLQ9H1B7 796 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 DHX33Q9H6R0 707 aaKnown RBP17.31■□□□□ 0.36
CSF1R-209ENST00000543093 MINDY3Q9H8M7 445 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 BRMS1Q9HCU9 246 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 LIMD1Q9UGP4 676 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 C2orf16Q68DN1 1984 aa17.31■□□□□ 0.36
CSF1R-209ENST00000543093 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 DDHD2O94830 711 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 P4HBP07237 508 aaKnown RBP17.3■□□□□ 0.36
CSF1R-209ENST00000543093 GCFC2P16383 781 aaKnown RBP17.3■□□□□ 0.36
CSF1R-209ENST00000543093 KRT2P35908 639 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 RFC5P40937 340 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
CSF1R-209ENST00000543093 LAMTOR4Q0VGL1 99 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 UBXN11Q5T124 520 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 PPP4R3AQ6IN85 833 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 SRGAP1Q7Z6B7 1085 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 MRPL10Q7Z7H8 261 aaKnown RBP17.3■□□□□ 0.36
CSF1R-209ENST00000543093 PPFIBP1Q86W92 1011 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 EXOC8Q8IYI6 725 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 KLHL5Q96PQ7 755 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 FAM193BQ96PV7 902 aaPredicted RBP17.3■□□□□ 0.36
CSF1R-209ENST00000543093 EMILIN2Q9BXX0 1053 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 SFXN1Q9H9B4 322 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
CSF1R-209ENST00000543093 PLXNA3P51805 1871 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 CNTNAP2Q9UHC6 1331 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 H0Y858 1186 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 MARCH6O60337 910 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 CCNT1O60563 726 aaKnown RBP17.29■□□□□ 0.36
CSF1R-209ENST00000543093 JAK2O60674 1132 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 POMCP01189 267 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 FDPSP14324 419 aaKnown RBP17.29■□□□□ 0.36
CSF1R-209ENST00000543093 KLRC2P26717 231 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 HOXA11P31270 313 aaPredicted RBP17.29■□□□□ 0.36
CSF1R-209ENST00000543093 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
CSF1R-209ENST00000543093 TRIM29Q14134 588 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 EPHA7Q15375 998 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 PIK3AP1Q6ZUJ8 805 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 PLCD3Q8N3E9 789 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 HAS1Q92839 578 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 NAP1L4Q99733 375 aaKnown RBP17.29■□□□□ 0.36
CSF1R-209ENST00000543093 LXNQ9BS40 222 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 TMEM175Q9BSA9 504 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 USTQ9Y2C2 406 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 FAN1Q9Y2M0 1017 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 PPME1Q9Y570 386 aa17.29■□□□□ 0.36
CSF1R-209ENST00000543093 GALR2O43603 387 aaPredicted RBP17.28■□□□□ 0.36
CSF1R-209ENST00000543093 ST18O60284 1047 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 GFRA3O60609 400 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 ALDH2P05091 517 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 CNPP09543 421 aaKnown RBP17.28■□□□□ 0.36
CSF1R-209ENST00000543093 CLCN4P51793 760 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 NUBP1P53384 320 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 EMC2Q15006 297 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 XKR9Q5GH70 373 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 GPR149Q86SP6 731 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 C4orf19Q8IY42 314 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 TMEM105Q8N8V8 129 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 RNF149Q8NC42 400 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 TCP11Q8WWU5 503 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 DYDC2Q96IM9 177 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 KANSL3Q9P2N6 904 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
CSF1R-209ENST00000543093 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.36
CSF1R-209ENST00000543093 NRP1O14786 923 aa17.27■□□□□ 0.36
CSF1R-209ENST00000543093 TBX3O15119 743 aa17.27■□□□□ 0.36
CSF1R-209ENST00000543093 NCLP19338 710 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms