RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TOP1MTQ969P6 601 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 GBP4Q96PP9 640 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 FIZ1Q96SL8 496 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 TRAIPQ9BWF2 469 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 PANK4Q9NVE7 773 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 TRIOBPQ9H2D6 2365 aa18.85■□□□□ 0.61
RABGGTA-203ENST00000543002 B4GALT5O43286 388 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 PRPF40AO75400 957 aaKnown RBP18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 MAPTP10636 758 aaKnown RBP18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 ARF4P18085 180 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 UBE2HP62256 183 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 ASIC1P78348 528 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 FAM189BP81408 668 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 SNW1Q13573 536 aaKnown RBP18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 FAM109BQ6ICB4 259 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 TAS1R3Q7RTX0 852 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 HAUS6Q7Z4H7 955 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 HERC6Q8IVU3 1022 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 FAM178BQ8IXR5 827 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 GRAMD1CQ8IYS0 662 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 SLC17A8Q8NDX2 589 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 CCDC51Q96ER9 411 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 BLZF1Q9H2G9 400 aa18.84■□□□□ 0.61
RABGGTA-203ENST00000543002 CNTNAP2Q9UHC6 1331 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 MYL1P05976 194 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 LIG1P18858 919 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 CASP1P29466 404 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 PRPF4BQ13523 1007 aaKnown RBP18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 CUL4BQ13620 913 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 HERC4Q5GLZ8 1057 aaPredicted RBP18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 TWF2Q6IBS0 349 aaKnown RBP18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 KANK3Q6NY19 840 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 NOTUMQ6P988 496 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 TMCO2Q7Z6W1 182 aaPredicted RBP18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 CRIPAKQ8N1N5 446 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 CPB2Q96IY4 423 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 ST6GALNAC4Q9H4F1 302 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 OLFML3Q9NRN5 406 aa18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.61
RABGGTA-203ENST00000543002 TTC3P53804 2025 aa18.83■□□□□ 0.6
RABGGTA-203ENST00000543002 A0A0U1RQF3 1178 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 A0A1B0GUA9 196 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 PVALEFA0A1B0GWK0 134 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 GRXCR1A8MXD5 290 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 K7ENM7 598 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 GTPBP6O43824 516 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 GJB5O95377 273 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 EDN1P05305 212 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 NMT1P30419 496 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 ABCD1P33897 745 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 SMAD3P84022 425 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 COASYQ13057 564 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 HABP4Q5JVS0 413 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 UNC13DQ70J99 1090 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 NPAS4Q8IUM7 802 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 CCDC34Q96HJ3 373 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 TIGD1Q96MW7 591 aa18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 ELAC1Q9H777 363 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-203ENST00000543002 PTPRSQ13332 1948 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 TTLL13PA6NNM8 815 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 ZNF623O75123 536 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 NR1I2O75469 434 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 UPP2O95045 317 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 STAG3L1P0CL83 205 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 SKIP12755 728 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 RAB27AP51159 221 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 GTF2BQ00403 316 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 STRN3Q13033 797 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 UBXN11Q5T124 520 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 NT5DC1Q5TFE4 455 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 ZNF720Q7Z2F6 126 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 ECHDC2Q86YB7 292 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 MRPL4Q9BYD3 311 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 MRPL44Q9H9J2 332 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 FAM105AQ9NUU6 356 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 TMEM161AQ9NX61 479 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 USP20Q9Y2K6 914 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 PCDHB7Q9Y5E2 793 aa18.81■□□□□ 0.6
RABGGTA-203ENST00000543002 N4BP3O15049 544 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 RABGGTBP53611 331 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 EHHADHQ08426 723 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 TMEM132AQ24JP5 1023 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 FAM117BQ6P1L5 589 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 SLC27A1Q6PCB7 646 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 RAD9AQ99638 391 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 ACO2Q99798 780 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 ZBED2Q9BTP6 218 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 STRA6Q9BX79 667 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 PDZD7Q9H5P4 517 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 TBC1D7Q9P0N9 293 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 LRFN2Q9ULH4 789 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 TBX20Q9UMR3 447 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 TNFSF13BQ9Y275 285 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 PCDHB2Q9Y5E7 798 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 PCDHA11Q9Y5I1 949 aa18.8■□□□□ 0.6
RABGGTA-203ENST00000543002 KLRC4O43908 158 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 PPP1R37O75864 691 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 EOMESO95936 686 aa18.79■□□□□ 0.6
RABGGTA-203ENST00000543002 PRR29P0C7W0 189 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms