RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 PGBD4Q96DM1 585 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 CPB2Q96IY4 423 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 RUSC1Q9BVN2 902 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 CSRNP2Q9H175 543 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 FBXO2Q9UK22 296 aaPredicted RBP17.09■□□□□ 0.33
ECHDC2-223ENST00000542552 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 GUCY2CP25092 1073 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 UBA7P41226 1012 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 SLC12A3P55017 1021 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 COL19A1Q14993 1142 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 LONRF3Q496Y0 759 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 SPOUT1Q5T280 376 aaKnown RBP17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 GLB1LQ6UWU2 654 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 CNNM3Q8NE01 707 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 LRRC15Q8TF66 581 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 PLIN2Q99541 437 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 TIPINQ9BVW5 301 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 COG5Q9UP83 839 aa17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 SRPRBQ9Y5M8 271 aaKnown RBP17.08■□□□□ 0.32
ECHDC2-223ENST00000542552 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 TTLL13PA6NNM8 815 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 INPPL1O15357 1258 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 HIP1RO75146 1068 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 FGF18O76093 207 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 PLA2G4BP0C869 781 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 EFNA5P52803 228 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 PLCB3Q01970 1234 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 UBE3AQ05086 875 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 SKIV2LQ15477 1246 aaKnown RBP17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 TCEAL5Q5H9L2 206 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 NOMO2Q5JPE7 1267 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 SLC27A1Q6PCB7 646 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 POF1BQ8WVV4 589 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 IFT74Q96LB3 600 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 TBC1D13Q9NVG8 400 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 KCND2Q9NZV8 630 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 IPPQ9Y573 584 aa17.07■□□□□ 0.32
ECHDC2-223ENST00000542552 TTC28Q96AY4 2481 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 ACKR2O00590 384 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 EDN1P05305 212 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 MARCKSP29966 332 aaPredicted RBP17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 NPTX2P47972 431 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 AFF1P51825 1210 aaKnown RBP17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 MRPS5P82675 430 aaKnown RBP17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 MAPK6Q16659 721 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 USP49Q70CQ1 688 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 DEPTORQ8TB45 409 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 HLA-CQ95604 372 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 CALML4Q96GE6 196 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 DRC1Q96MC2 740 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 ZNF558Q96NG5 402 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 ASB2Q96Q27 587 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 NTPCRQ9BSD7 190 aaKnown RBP17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 KIFC3Q9BVG8 833 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 C17orf75Q9HAS0 396 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 UBN1Q9NPG3 1134 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 LZTS1Q9Y250 596 aa17.06■□□□□ 0.32
ECHDC2-223ENST00000542552 BDP1A6H8Y1 2624 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 PRKCBP05771 671 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 HSP90AA1P07900 732 aaKnown RBP17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 ITGA4P13612 1032 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 PLCG1P19174 1290 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 PPM1AP35813 382 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 PBX3P40426 434 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 PEX3P56589 373 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 BCAR1P56945 870 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 TFF2Q03403 129 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 CEBPZQ03701 1054 aaKnown RBP17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 KARSQ15046 597 aaKnown RBP17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 THNSL1Q8IYQ7 743 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 SLC39A11Q8N1S5 342 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 PDZD7Q9H5P4 517 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 NRDE2Q9H7Z3 1164 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 SPG21Q9NZD8 308 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 ARHGAP28Q9P2N2 729 aa17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 DAXXQ9UER7 740 aaPredicted RBP17.05■□□□□ 0.32
ECHDC2-223ENST00000542552 HES2Q9Y543 173 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms