RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 NPIPB8E9PQR5 432 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 NEMP1O14524 444 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 KDM1AO60341 852 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 HSP90B1P14625 803 aaKnown RBP5.1□□□□□ -1.59
LEMD3-204ENST00000542032 SCNN1GP51170 649 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 ATXN1P54253 815 aaKnown RBP5.1□□□□□ -1.59
LEMD3-204ENST00000542032 TRIM25Q14258 630 aaKnown RBP5.1□□□□□ -1.59
LEMD3-204ENST00000542032 PDCD1Q15116 288 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 FKBP15Q5T1M5 1219 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 FNDC7Q5VTL7 733 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 NAIF1Q69YI7 327 aaPredicted RBP5.1□□□□□ -1.59
LEMD3-204ENST00000542032 KRT40Q6A162 431 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 SDE2Q6IQ49 451 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 MFSD5Q6N075 450 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 Q6ZRM9 215 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 TAS1R1Q7RTX1 841 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 ZNF512Q96ME7 567 aaPredicted RBP5.1□□□□□ -1.59
LEMD3-204ENST00000542032 PRDM12Q9H4Q4 367 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 IFT22Q9H7X7 185 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 ING3Q9NXR8 418 aa5.1□□□□□ -1.59
LEMD3-204ENST00000542032 EVLQ9UI08 416 aaPredicted RBP5.1□□□□□ -1.59
LEMD3-204ENST00000542032 KLRG2A4D1S0 409 aaPredicted RBP5.09□□□□□ -1.59
LEMD3-204ENST00000542032 NRP2O60462 931 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 ALDH1A2O94788 518 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 PEX11BO96011 259 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 CDK11BP21127 795 aaKnown RBP5.09□□□□□ -1.59
LEMD3-204ENST00000542032 ID4P47928 161 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 ELAVL1Q15717 326 aaKnown RBP5.09□□□□□ -1.59
LEMD3-204ENST00000542032 LSM12Q3MHD2 195 aaKnown RBP5.09□□□□□ -1.59
LEMD3-204ENST00000542032 ATP13A4Q4VNC1 1196 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 TAF7LQ5H9L4 462 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 DDX46Q7L014 1031 aaKnown RBP5.09□□□□□ -1.59
LEMD3-204ENST00000542032 STRA8Q7Z7C7 330 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 MDGA1Q8NFP4 955 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 PLEKHG4BQ96PX9 1271 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 RCAN3Q9UKA8 241 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 USP18Q9UMW8 372 aa5.09□□□□□ -1.59
LEMD3-204ENST00000542032 TMA7Q9Y2S6 64 aaKnown RBP5.09□□□□□ -1.59
LEMD3-204ENST00000542032 XDHP47989 1333 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.08□□□□□ -1.6
LEMD3-204ENST00000542032 NRP1O14786 923 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 ULK1O75385 1050 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 STC2O76061 302 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 CFBP00751 764 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 HMGB1P09429 215 aaKnown RBP5.08□□□□□ -1.6
LEMD3-204ENST00000542032 MASP1P48740 699 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 MAN2A2P49641 1150 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 NPEPPSP55786 919 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 WNT3AP56704 352 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 SLC25A3Q00325 362 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 PITRM1Q5JRX3 1037 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 METTL24Q5JXM2 366 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 APBB1IPQ7Z5R6 666 aaPredicted RBP5.08□□□□□ -1.6
LEMD3-204ENST00000542032 AFAP1L2Q8N4X5 818 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 MSL3Q8N5Y2 521 aaKnown RBP5.08□□□□□ -1.6
LEMD3-204ENST00000542032 AMER2Q8N7J2 671 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 CLRN3Q8NCR9 226 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 USP7Q93009 1102 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 PDCD2LQ9BRP1 358 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 ZNF341Q9BYN7 854 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 ANO3Q9BYT9 981 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 CAAP1Q9H8G2 361 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 APOBEC2Q9Y235 224 aaKnown RBP5.08□□□□□ -1.6
LEMD3-204ENST00000542032 HS3ST3A1Q9Y663 406 aa5.08□□□□□ -1.6
LEMD3-204ENST00000542032 GRXCR1A8MXD5 290 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 HOXA3O43365 443 aaPredicted RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 VIL1P09327 827 aaKnown RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 CLEC2LP0C7M8 214 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 SESN3P58005 492 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 TUBA3CQ13748 450 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 TOB2Q14106 344 aaPredicted RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 SMN1Q16637 294 aaKnown RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 FSCN1Q16658 493 aaKnown RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 DCAF17Q5H9S7 520 aaPredicted RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 TUBA3EQ6PEY2 450 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 ELOA2Q8IYF1 753 aaPredicted RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 OR14C36Q8NHC7 312 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 TTC1Q99614 292 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 TOPORSQ9NS56 1045 aaPredicted RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 PARPBPQ9NWS1 579 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 NOC2LQ9Y3T9 749 aaKnown RBP5.07□□□□□ -1.6
LEMD3-204ENST00000542032 CDY2AQ9Y6F7 541 aa5.07□□□□□ -1.6
LEMD3-204ENST00000542032 MFAP3LO75121 409 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 RAB11FIP3O75154 756 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 TMEM127O75204 238 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 IPO13O94829 963 aaKnown RBP5.06□□□□□ -1.6
LEMD3-204ENST00000542032 ZNF202O95125 648 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 EYA4O95677 639 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 NRG3P56975 720 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 MEF2AQ02078 507 aaPredicted RBP5.06□□□□□ -1.6
LEMD3-204ENST00000542032 PPARAQ07869 468 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 MGAT5Q09328 741 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 MRPL49Q13405 166 aaKnown RBP5.06□□□□□ -1.6
LEMD3-204ENST00000542032 C19orf54Q5BKX5 351 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 CCDC62Q6P9F0 684 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 GLB1L2Q8IW92 636 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 LILRA3Q8N6C8 439 aaPredicted RBP5.06□□□□□ -1.6
LEMD3-204ENST00000542032 ACAP3Q96P50 834 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 ORAI2Q96SN7 254 aa5.06□□□□□ -1.6
LEMD3-204ENST00000542032 MNTQ99583 582 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms