RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 IL10P22301 178 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 ARL6IP4Q66PJ3 421 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 RNF135Q8IUD6 432 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 NSUN7Q8NE18 718 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 OR6P1Q8NGX9 317 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 BFARQ9NZS9 450 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 MYOM2P54296 1465 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 SFI1A8K8P3 1242 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 VGLL3A8MV65 326 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 HIST1H2AGP0C0S8 130 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 IMPDH2P12268 514 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 HIST1H2ADP20671 130 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 KCNJ6P48051 423 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 SNRNP48Q6IEG0 339 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 ADCK2Q7Z695 626 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 XXYLT1Q8NBI6 393 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 SCFD1Q8WVM8 642 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 MAP4K1Q92918 833 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 HIST1H2AHQ96KK5 128 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 HIST1H2AJQ99878 128 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 H2AFJQ9BTM1 129 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 RAVER2Q9HCJ3 691 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 TRPC7Q9HCX4 862 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 TMEM161AQ9NX61 479 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 MAD2L2Q9UI95 211 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 ABCB11O95342 1321 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 HMOX2P30519 316 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 FAM83BQ5T0W9 1011 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 ANO5Q75V66 913 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 PPM1NQ8N819 430 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 NSUN6Q8TEA1 469 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 MRPL4Q9BYD3 311 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 NFU1Q9UMS0 254 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 CCDC78A2IDD5 438 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 GUCA1CO95843 209 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 SFNP31947 248 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 SERPINB10P48595 397 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 ABCE1P61221 599 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 E4F1Q66K89 784 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 MXD3Q9BW11 206 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 C6orf203Q9P0P8 240 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 TRAF3IP3Q9Y228 551 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 TARSL2A2RTX5 802 aaKnown RBP11.39□□□□□ -0.59
GABRB3-204ENST00000541819 PRKAB2O43741 272 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 COPB2P35606 906 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 EMBQ6PCB8 327 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 VSTM4Q8IW00 320 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 ICA1LQ8NDH6 482 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 PIGOQ8TEQ8 1089 aa11.39□□□□□ -0.59
GABRB3-204ENST00000541819 USP17L5A8MUK1 530 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 A8MXQ7 604 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 CCDC159P0C7I6 412 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 SLC9A1P19634 815 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 GNA15P30679 374 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 PMS1P54277 932 aaKnown RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 LRRC8BQ6P9F7 803 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 APOBEC3FQ8IUX4 373 aaKnown RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 ZNF555Q8NEP9 628 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 DNAJC7Q99615 494 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 GH2P01242 217 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 NR5A1Q13285 461 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 UNC13DQ70J99 1090 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 SPATA2LQ8IUW3 424 aaPredicted RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 OSBPL10Q9BXB5 764 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 SAMSN1Q9NSI8 373 aaKnown RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 ORC4O43929 436 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 PALMO75781 387 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 WDR47O94967 919 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 CDK17Q00537 523 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 ARMC6Q6NXE6 501 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 C11orf57Q6ZUT1 292 aaPredicted RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 C11orf70Q9BRQ4 267 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 NUP85Q9BW27 656 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 NDEL1Q9GZM8 345 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 PYCARDQ9ULZ3 195 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 ATP10BO94823 1461 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 WBP4O75554 376 aaKnown RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 CHRNA3P32297 505 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 GRIK1P39086 918 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 CHMP1BQ7LBR1 199 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 ZNF564Q8TBZ8 553 aaPredicted RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 SNX24Q9Y343 169 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 FAM32AQ9Y421 112 aaKnown RBP11.38□□□□□ -0.59
GABRB3-204ENST00000541819 ZHX2Q9Y6X8 837 aa11.38□□□□□ -0.59
GABRB3-204ENST00000541819 SLC16A4O15374 487 aa11.37□□□□□ -0.59
GABRB3-204ENST00000541819 NR3C1P04150 777 aa11.37□□□□□ -0.59
GABRB3-204ENST00000541819 CHGBP05060 677 aa11.37□□□□□ -0.59
GABRB3-204ENST00000541819 TRADDQ15628 312 aa11.37□□□□□ -0.59
GABRB3-204ENST00000541819 WRNIP1Q96S55 665 aa11.37□□□□□ -0.59
GABRB3-204ENST00000541819 POLR3FQ9H1D9 316 aaPredicted RBP11.37□□□□□ -0.59
GABRB3-204ENST00000541819 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
GABRB3-204ENST00000541819 H2AFY2Q9P0M6 372 aaPredicted RBP11.37□□□□□ -0.59
GABRB3-204ENST00000541819 PCSK1NQ9UHG2 260 aa11.37□□□□□ -0.59
GABRB3-204ENST00000541819 DBNLQ9UJU6 430 aaKnown RBP11.37□□□□□ -0.59
GABRB3-204ENST00000541819 ZBTB1Q9Y2K1 713 aa11.37□□□□□ -0.59
GABRB3-204ENST00000541819 RPAP1Q9BWH6 1393 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms