RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ZNF667Q5HYK9 610 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 UTP6Q9NYH9 597 aaKnown RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 PPP1R16BQ96T49 567 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 UVRAGQ9P2Y5 699 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
HMGA2-210ENST00000541363 SUCLG2Q96I99 432 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 UNC45AQ9H3U1 944 aa16.26■□□□□ 0.19
HMGA2-210ENST00000541363 MLNP12872 115 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 CHRNA3P32297 505 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 CSTF3Q12996 717 aaKnown RBP16.25■□□□□ 0.19
HMGA2-210ENST00000541363 SLC44A4Q53GD3 710 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 OR6P1Q8NGX9 317 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 C17orf80Q9BSJ5 609 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 KLHL18O94889 574 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 PPP1R36Q96LQ0 422 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 CNGB3Q9NQW8 809 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 NCKAP1LP55160 1127 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 UBXN2AP68543 259 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 LRRC63Q05C16 580 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 ZC3H7BQ9UGR2 993 aaKnown RBP16.25■□□□□ 0.19
HMGA2-210ENST00000541363 PDXDC2PQ6P474 469 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 RNPEPQ9H4A4 650 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 ADAM22Q9P0K1 906 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 ALDH18A1P54886 795 aaKnown RBP16.25■□□□□ 0.19
HMGA2-210ENST00000541363 CSE1LP55060 971 aaKnown RBP16.25■□□□□ 0.19
HMGA2-210ENST00000541363 GPS1Q13098 491 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 FKBP9O95302 570 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 AASDHQ4L235 1098 aaPredicted RBP16.25■□□□□ 0.19
HMGA2-210ENST00000541363 DAB2IPQ5VWQ8 1189 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 FKBP9P1Q75LS8 142 aa16.25■□□□□ 0.19
HMGA2-210ENST00000541363 RPRD1BQ9NQG5 326 aaKnown RBP16.25■□□□□ 0.19
HMGA2-210ENST00000541363 EIF4E1BA6NMX2 242 aaKnown RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 MIF4GDA9UHW6 222 aaKnown RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 PYCARDQ9ULZ3 195 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 TNNQ9UQP3 1299 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 UBE4BO95155 1302 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 MARK3P27448 753 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 TYK2P29597 1187 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 USP39Q53GS9 565 aaKnown RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 TMA16Q96EY4 203 aaKnown RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 WWP1Q9H0M0 922 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 CCDC134Q9H6E4 229 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 PALMO75781 387 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 MLH1P40692 756 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 SHROOM1Q2M3G4 852 aaPredicted RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 EME1Q96AY2 570 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 SPATA16Q9BXB7 569 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 DDX56Q9NY93 547 aaKnown RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 A0A1W2PQ27 194 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 A0A1W2PQ64 194 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 A0A1W2PQD8 194 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 GUCA1AP43080 201 aaPredicted RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 TSC22D1Q15714 1073 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 RHPN2Q8IUC4 686 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 YAF2Q8IY57 180 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 CCDC17Q96LX7 622 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 DOLKQ9UPQ8 538 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 hCG_1984214I3L0E3 225 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 HUS1O60921 280 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 SLC16A1P53985 500 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 MKRN3Q13064 507 aaKnown RBP16.24■□□□□ 0.19
HMGA2-210ENST00000541363 ZNF699Q32M78 642 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 AP3B1O00203 1094 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 FYNP06241 537 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 ITGAXP20702 1163 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 TEX2Q8IWB9 1127 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 SNF8Q96H20 258 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 TNRQ92752 1358 aa16.24■□□□□ 0.19
HMGA2-210ENST00000541363 ENO1P06733 434 aaKnown RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 ADD1P35611 737 aaKnown RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 MRPL48Q96GC5 212 aaKnown RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 TSC22D2O75157 780 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 HOXB7P09629 217 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 PLA2G4BP0C869 781 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 ACTN3Q08043 901 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 POTEEQ6S8J3 1075 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 TRIM63Q969Q1 353 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 BCS1LQ9Y276 419 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 PDAP1Q13442 181 aaKnown RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 KIRREL3Q8IZU9 778 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 ATP11CQ8NB49 1132 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 AGR3Q8TD06 166 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 SPRTNQ9H040 489 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 MYL3P08590 195 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 GPC5P78333 572 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 EIF2B5Q13144 721 aaKnown RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 PCYOX1LQ8NBM8 494 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 RSPH1Q8WYR4 309 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 KRT84Q9NSB2 600 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 F5H423 210 aaPredicted RBP16.23■□□□□ 0.19
HMGA2-210ENST00000541363 DFFAO00273 331 aa16.23■□□□□ 0.19
HMGA2-210ENST00000541363 HNRNPH2P55795 449 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms