RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 FAM160B1Q5W0V3 765 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 MIS18BP1Q6P0N0 1132 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 FAM173BQ6P4H8 233 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 B3GNT9Q6UX72 402 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 HFE2Q6ZVN8 426 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 OTOP1Q7RTM1 612 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 DHX37Q8IY37 1157 aaKnown RBP6.41□□□□□ -1.38
CDKN3-206ENST00000541304 RASSF8Q8NHQ8 419 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 PPTC7Q8NI37 304 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 CD99L2Q8TCZ2 262 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 HAS1Q92839 578 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 FAM167AQ96KS9 214 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 TIPINQ9BVW5 301 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 SEZ6LQ9BYH1 1024 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 RBSNQ9H1K0 784 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 TMEM60Q9H2L4 133 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 MLXIPQ9HAP2 919 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 DISC1Q9NRI5 854 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 CXXC1Q9P0U4 656 aaPredicted RBP6.41□□□□□ -1.38
CDKN3-206ENST00000541304 VAV3Q9UKW4 847 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 ZNF215Q9UL58 517 aaPredicted RBP6.41□□□□□ -1.38
CDKN3-206ENST00000541304 FAM184BQ9ULE4 1060 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 PCDHA10Q9Y5I2 948 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 KCNMB2Q9Y691 235 aa6.41□□□□□ -1.38
CDKN3-206ENST00000541304 BAZ2BQ9UIF8 2168 aaKnown RBP6.41□□□□□ -1.38
CDKN3-206ENST00000541304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 ADAMTS3O15072 1205 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 DHX15O43143 795 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 SEPT4O43236 478 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 EDIL3O43854 480 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 ADCY3O60266 1144 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 MMP20O60882 483 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 DUSP11O75319 330 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 PRPF40AO75400 957 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 FARP2O94887 1054 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 SNAI1O95863 264 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CYBAP13498 195 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CYP2B6P20813 491 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 MARCKSP29966 332 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 GRK4P32298 578 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 ABCD1P33897 745 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 TECP42680 631 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 SYKP43405 635 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 PSMC5P62195 406 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 HTRA3P83110 453 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 ITGB3BPQ13352 177 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 TRIP4Q15650 581 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 FOXD4L6Q3SYB3 417 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 PRSS36Q5K4E3 855 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CELF3Q5SZQ8 465 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 MAP3K21Q5TCX8 1036 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CCDC62Q6P9F0 684 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 SEPT14Q6ZU15 432 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 MIER3Q7Z3K6 550 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CTU1Q7Z7A3 348 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CABP7Q86V35 215 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 FBXO16Q8IX29 292 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 ETFBKMTQ8IXQ9 262 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 C4orf19Q8IY42 314 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CEP57L1Q8IYX8 460 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 NPLOC4Q8TAT6 608 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 AFAP1L1Q8TED9 768 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 SNX29Q8TEQ0 813 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 SEPT1Q8WYJ6 367 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 TP53INP1Q96A56 240 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 PLD4Q96BZ4 506 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 NSUN5Q96P11 429 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 JPH2Q9BR39 696 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 MKNK1Q9BUB5 465 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 KATNAL1Q9BW62 490 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 FTOQ9C0B1 505 aaKnown RBP eCLIP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 KATNBL1Q9H079 304 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 CSRNP2Q9H175 543 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 TNMDQ9H2S6 317 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 AZI2Q9H6S1 392 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 ZSWIM4Q9H7M6 989 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 LMBRD1Q9NUN5 540 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 KCNG1Q9UIX4 513 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 DDX41Q9UJV9 622 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 ZHX1Q9UKY1 873 aaPredicted RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 KCNH3Q9ULD8 1083 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 HPSEQ9Y251 543 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 SAMM50Q9Y512 469 aa6.4□□□□□ -1.38
CDKN3-206ENST00000541304 DDX49Q9Y6V7 483 aaKnown RBP6.4□□□□□ -1.38
CDKN3-206ENST00000541304 IGSF9BQ9UPX0 1349 aa6.4□□□□□ -1.39
CDKN3-206ENST00000541304 MGAMO43451 1857 aa6.4□□□□□ -1.39
CDKN3-206ENST00000541304 LCTP09848 1927 aa6.4□□□□□ -1.39
CDKN3-206ENST00000541304 PLXNA1Q9UIW2 1896 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 MYH7BA7E2Y1 1941 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 PEX10O60683 326 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 PPFIA4O75335 1185 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 CABYRO75952 493 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 ATG7O95352 703 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 GGPS1O95749 300 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 SUPT20HL2P0C7V6 817 aa6.39□□□□□ -1.39
CDKN3-206ENST00000541304 ZNF865P0CJ78 1059 aaPredicted RBP6.39□□□□□ -1.39
CDKN3-206ENST00000541304 ARP10275 920 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms