RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 SYCE1LA8MT33 242 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 C7P10643 843 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 CYP19A1P11511 503 aaPredicted RBP6.62□□□□□ -1.35
LMO3-225ENST00000541295 ATP6V1B1P15313 513 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SSTP61278 116 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 KRT85P78386 507 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 GOLGA8FQ08AF8 430 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 GOLGA8DPQ0D2H9 430 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 DHX34Q14147 1143 aaKnown RBP6.62□□□□□ -1.35
LMO3-225ENST00000541295 C3orf67Q6ZVT6 689 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 PJA1Q8NG27 643 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 DDI1Q8WTU0 396 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 MED30Q96HR3 178 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 NCOR1P1Q9H4R4 102 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SMYD2Q9NRG4 433 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 ECHDC1Q9NTX5 307 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SIRT5Q9NXA8 310 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 MTRRQ9UBK8 725 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 COL22A1Q8NFW1 1626 aaPredicted RBP6.62□□□□□ -1.35
LMO3-225ENST00000541295 LAMB4A4D0S4 1761 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SALL3Q9BXA9 1300 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 LOC102724428A0A0B4J2F2 783 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 INO80B-WBP1J3KQ70 363 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 IGF2BP3O00425 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
LMO3-225ENST00000541295 GLRX3O76003 335 aaKnown RBP6.62□□□□□ -1.35
LMO3-225ENST00000541295 NPTXRO95502 500 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 BAG2O95816 211 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 APOA4P06727 396 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 CDK4P11802 303 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 ALAS1P13196 640 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 PPP1R2P41236 205 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 AP3M2P53677 418 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 ALDH18A1P54886 795 aaKnown RBP6.62□□□□□ -1.35
LMO3-225ENST00000541295 SLC12A2P55011 1212 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SIK1P57059 783 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SULT2A1Q06520 285 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 ASPHQ12797 758 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 PPFIA1Q13136 1202 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 BLMHQ13867 455 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 TTF1Q15361 905 aaPredicted RBP6.62□□□□□ -1.35
LMO3-225ENST00000541295 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 PDE12Q6L8Q7 609 aaKnown RBP6.62□□□□□ -1.35
LMO3-225ENST00000541295 PPP1R2P3Q6NXS1 205 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 MZT2BQ6NZ67 158 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 BORAQ6PGQ7 559 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 NSMCE1Q8WV22 266 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 DESI2Q9BSY9 194 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 KRT23Q9C075 422 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.62□□□□□ -1.35
LMO3-225ENST00000541295 L1RE1Q9UN81 338 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 CHMP2BQ9UQN3 213 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SNCAIPQ9Y6H5 919 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 SLC4A7Q9Y6M7 1214 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 ARFGEF2Q9Y6D5 1785 aa6.62□□□□□ -1.35
LMO3-225ENST00000541295 GLI3P10071 1580 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 UTYO14607 1347 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 MYO3BQ8WXR4 1341 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 C17orf113A0A1B0GUU1 675 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CLRN2A0PK11 232 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 KMOO15229 486 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 RNGTTO60942 597 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 DAB1O75553 588 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 FDX1P10109 184 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 TARSP26639 723 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 ZNF76P36508 570 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 VBP1P61758 197 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CSTF3Q12996 717 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 CYLC2Q14093 348 aaPredicted RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 MOGQ16653 247 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 ANO4Q32M45 955 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 HSP90AA4PQ58FG1 418 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 METTL3Q86U44 580 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 CCDC13Q8IYE1 715 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 PPFIBP2Q8ND30 876 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 NLRP7Q8WX94 980 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 SEPT1Q8WYJ6 367 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 EDC3Q96F86 508 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 FGD4Q96M96 766 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CFAP57Q96MR6 1250 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 ESYT1Q9BSJ8 1104 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 TRMT112Q9UI30 125 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 PTBP2Q9UKA9 531 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 CLEC4AQ9UMR7 237 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 ITGB4P16144 1822 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 MAP3K15Q6ZN16 1313 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 DOT1LQ8TEK3 1739 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 MYO1FO00160 1098 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 TUBB4AP04350 444 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 IFIT1P09914 478 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 CFL1P23528 166 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 ACAT1P24752 427 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 SOX5P35711 763 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CD86P42081 329 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 CRKLP46109 303 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 RENBPP51606 427 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 MYL6P60660 151 aa6.61□□□□□ -1.35
LMO3-225ENST00000541295 PTPN12Q05209 780 aaKnown RBP6.61□□□□□ -1.35
LMO3-225ENST00000541295 HSPA14Q0VDF9 509 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms