RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 DNM1LO00429 736 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 CEP104O60308 925 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 TLR2O60603 784 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 PLA2G6O60733 806 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 RGS20O76081 388 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 PLA2G4BP0C869 781 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 QPCTQ16769 361 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 FAM228AQ86W67 206 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 LENG9Q96B70 501 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 GGT7Q9UJ14 662 aa15.52■□□□□ 0.08
SFSWAP-210ENST00000541286 NR2F2P24468 414 aa15.52■□□□□ 0.07
SFSWAP-210ENST00000541286 SATB1Q01826 763 aa15.52■□□□□ 0.07
SFSWAP-210ENST00000541286 CCDC121Q6ZUS5 278 aa15.52■□□□□ 0.07
SFSWAP-210ENST00000541286 ADAT2Q7Z6V5 191 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-210ENST00000541286 MMGT1Q8N4V1 131 aa15.52■□□□□ 0.07
SFSWAP-210ENST00000541286 RNF217Q8TC41 542 aa15.52■□□□□ 0.07
SFSWAP-210ENST00000541286 SEPT11Q9NVA2 429 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-210ENST00000541286 ESYT2A0FGR8 921 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 CLIC2O15247 247 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 KIF1CO43896 1103 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 SLC9A1P19634 815 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 NR1D1P20393 614 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 CCNHP51946 323 aaPredicted RBP15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 EPHB4P54760 987 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 ASIC2Q16515 512 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 FIGNQ5HY92 759 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 CCDC65Q8IXS2 484 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 GPRC5AQ8NFJ5 357 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 SGSM3Q96HU1 749 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 TRIM31Q9BZY9 425 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 PGM5Q15124 567 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 DDX42Q86XP3 938 aaKnown RBP eCLIP15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 FBXO16Q8IX29 292 aaPredicted RBP15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 MYCBPAPQ8TBZ2 947 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 COPS5Q92905 334 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 FAXDC2Q96IV6 333 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 FGD4Q96M96 766 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 LUC7LQ9NQ29 371 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 PCDHB13Q9Y5F0 798 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 ENO4A6NNW6 628 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 CYP2B6P20813 491 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 ADORA2AP29274 412 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 HSD17B4P51659 736 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 PRPF4BQ13523 1007 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 IFT20Q8IY31 132 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.51■□□□□ 0.071e-6■■■■■ 105
SFSWAP-210ENST00000541286 PXMP2Q9NR77 195 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 L3MBTL1Q9Y468 752 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 LOC285556D6RIA3 1793 aa15.51■□□□□ 0.07
SFSWAP-210ENST00000541286 EME2A4GXA9 379 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 MSH4O15457 936 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.074e-8■■■■■ 35.7
SFSWAP-210ENST00000541286 SP2Q02086 613 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 KCNH2Q12809 1159 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 SNCBQ16143 134 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 HGSNATQ68CP4 663 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 MAEAQ7L5Y9 396 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 PARP9Q8IXQ6 854 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 PDCD2LQ9BRP1 358 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 EPN3Q9H201 632 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 IKZF4Q9H2S9 585 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 TPX2Q9ULW0 747 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 CASP5P51878 434 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 CYB5D1Q6P9G0 228 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 RIOX2Q8IUF8 465 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 RGL1Q9NZL6 768 aa15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 ZNFX1Q9P2E3 1918 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-210ENST00000541286 EML1O00423 815 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 CETN3O15182 167 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 PPP1R37O75864 691 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 FSBPO95073 299 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 SERPING1P05155 500 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 NR3C2P08235 984 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 PSMC6P62333 389 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 CDK17Q00537 523 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 PTGISQ16647 500 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 GJB7Q6PEY0 223 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 FAM43BQ6ZT52 329 aaPredicted RBP15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 ANKRD23Q86SG2 305 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 CRYGNQ8WXF5 182 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 DNAJC19Q96DA6 116 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 MMP19Q99542 508 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 NOL4O94818 638 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 GPR142Q7Z601 462 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 TCP11Q8WWU5 503 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 CEP72Q9P209 647 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 RABGAP1Q9Y3P9 1069 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 LCTP09848 1927 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 IGLV3-22A0A075B6J6 115 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 SREBF1P36956 1147 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 NPLOC4Q8TAT6 608 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 TACO1Q9BSH4 297 aaKnown RBP15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 KCNH7Q9NS40 1196 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 FLRT1Q9NZU1 646 aa15.49■□□□□ 0.07
SFSWAP-210ENST00000541286 CLTAP09496 248 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 GCKP35557 465 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 TRIM32Q13049 653 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 RPS6KA1Q15418 735 aa15.48■□□□□ 0.07
SFSWAP-210ENST00000541286 PREPLQ4J6C6 727 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms