RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 PCSK9Q8NBP7 692 aaKnown RBP19.4■□□□□ 0.7
CLIP1-215ENST00000541108 CCDC113Q9H0I3 377 aa19.4■□□□□ 0.7
CLIP1-215ENST00000541108 HSPBP1Q9NZL4 362 aa19.4■□□□□ 0.7
CLIP1-215ENST00000541108 ANKRD63C9JTQ0 380 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 PES1O00541 588 aaKnown RBP19.39■□□□□ 0.69
CLIP1-215ENST00000541108 LIG4P49917 911 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 CYP2J2P51589 502 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 MCCD1P59942 119 aaPredicted RBP19.39■□□□□ 0.69
CLIP1-215ENST00000541108 HSP90AA2PQ14568 343 aaPredicted RBP19.39■□□□□ 0.69
CLIP1-215ENST00000541108 MAPK6Q16659 721 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 KIAA0319LQ8IZA0 1049 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 ZNF710Q8N1W2 664 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 C7orf31Q8N865 590 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 BICD1Q96G01 975 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 ERGIC2Q96RQ1 377 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 CBWD1Q9BRT8 395 aa19.39■□□□□ 0.69
CLIP1-215ENST00000541108 HMX1Q9NP08 348 aaPredicted RBP19.39■□□□□ 0.69
CLIP1-215ENST00000541108 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.39■□□□□ 0.697e-7■■■■□ 20.3
CLIP1-215ENST00000541108 INHAP05111 366 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 TBX2Q13207 712 aaPredicted RBP19.38■□□□□ 0.69
CLIP1-215ENST00000541108 CCSAPQ6IQ19 270 aaPredicted RBP19.38■□□□□ 0.69
CLIP1-215ENST00000541108 SLC39A4Q6P5W5 647 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 ZNF410Q86VK4 478 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 ZBTB10Q96DT7 871 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 FBXL18Q96ME1 805 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 NLRP4Q96MN2 994 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 FZD8Q9H461 694 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 IFT122Q9HBG6 1241 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 AKT3Q9Y243 479 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 SCN10AQ9Y5Y9 1956 aa19.38■□□□□ 0.69
CLIP1-215ENST00000541108 C17orf102A2RUQ5 167 aa19.37■□□□□ 0.69
CLIP1-215ENST00000541108 TISP43B9A030 160 aa19.37■□□□□ 0.69
CLIP1-215ENST00000541108 PHKA2P46019 1235 aa19.37■□□□□ 0.69
CLIP1-215ENST00000541108 INTS8Q75QN2 995 aaKnown RBP19.37■□□□□ 0.69
CLIP1-215ENST00000541108 RNF180Q86T96 592 aa19.37■□□□□ 0.69
CLIP1-215ENST00000541108 POMGNT1Q8WZA1 660 aa19.37■□□□□ 0.69
CLIP1-215ENST00000541108 MRPL4Q9BYD3 311 aaKnown RBP19.37■□□□□ 0.69
CLIP1-215ENST00000541108 KIAA1586Q9HCI6 787 aa19.37■□□□□ 0.69
CLIP1-215ENST00000541108 ACKR2O00590 384 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 ASGR1P07306 291 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 GJB1P08034 283 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 CHMP4BP1P59074 171 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 KCNH2Q12809 1159 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 TRIM14Q14142 442 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 FAM187BQ17R55 369 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 CXCL17Q6UXB2 119 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 IQCDQ96DY2 449 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 NUP58Q9BVL2 599 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 PCIF1Q9H4Z3 704 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 HDAC6Q9UBN7 1215 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 TSKSQ9UJT2 592 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 PTCH2Q9Y6C5 1203 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 CABYRO75952 493 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 LDHAP00338 332 aaKnown RBP19.36■□□□□ 0.69
CLIP1-215ENST00000541108 ENPEPQ07075 957 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 KCNA10Q16322 511 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 SESTD1Q86VW0 696 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 NME8Q8N427 588 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 CCDC150Q8NCX0 1101 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 SLC35C1Q96A29 364 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 PRIMPOLQ96LW4 560 aa19.36■□□□□ 0.69
CLIP1-215ENST00000541108 PRMT7Q9NVM4 692 aaPredicted RBP19.36■□□□□ 0.69
CLIP1-215ENST00000541108 A0A087WZ62 844 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 TOM1L1O75674 476 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 AFPP02771 609 aaKnown RBP19.35■□□□□ 0.69
CLIP1-215ENST00000541108 VTNP04004 478 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 PRKCBP05771 671 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 CYP2C9P11712 490 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 KRT13P13646 458 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 GPC3P51654 580 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 MBTD1Q05BQ5 628 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 PTPN21Q16825 1174 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 SRGAP1Q7Z6B7 1085 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 PPFIBP1Q86W92 1011 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 LRRC8AQ8IWT6 810 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 GPD1LQ8N335 351 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 FDXACB1Q9BRP7 624 aaPredicted RBP19.35■□□□□ 0.69
CLIP1-215ENST00000541108 TSEN34Q9BSV6 310 aaKnown RBP19.35■□□□□ 0.69
CLIP1-215ENST00000541108 TARS2Q9BW92 718 aaKnown RBP19.35■□□□□ 0.69
CLIP1-215ENST00000541108 GTF2IRD1Q9UHL9 959 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 PTPN22Q9Y2R2 807 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 CENPFP49454 3210 aa19.35■□□□□ 0.69
CLIP1-215ENST00000541108 INO80B-WBP1J3KQ70 363 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 NLRP11P59045 1033 aaKnown RBP19.34■□□□□ 0.69
CLIP1-215ENST00000541108 BFSP1Q12934 665 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 HIC1Q14526 733 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 PCBP1Q15365 356 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLIP1-215ENST00000541108 SNRNP35Q16560 246 aaKnown RBP19.34■□□□□ 0.69
CLIP1-215ENST00000541108 NBPF20Q3BBV1 942 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 FIGNQ5HY92 759 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 LHX8Q68G74 356 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 TAF2Q6P1X5 1199 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 DNAJC5GQ8N7S2 189 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 RDH13Q8NBN7 331 aa19.34■□□□□ 0.69
CLIP1-215ENST00000541108 ACO2Q99798 780 aaKnown RBP19.34■□□□□ 0.69
CLIP1-215ENST00000541108 INO80BQ9C086 356 aaPredicted RBP19.34■□□□□ 0.69
CLIP1-215ENST00000541108 A0A0B4J269 797 aa19.33■□□□□ 0.69
CLIP1-215ENST00000541108 GTPBP10A4D1E9 387 aaKnown RBP19.33■□□□□ 0.69
CLIP1-215ENST00000541108 CLDN3O15551 220 aa19.33■□□□□ 0.69
CLIP1-215ENST00000541108 TREHO43280 583 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms