RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TMEM150BA6NC51 233 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 DDX11L8A8MPP1 907 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 EVCP57679 992 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 ELMSAN1Q6PJG2 1045 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 AGMOQ6ZNB7 445 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 ANO5Q75V66 913 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 ETNPPLQ8TBG4 499 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 RSAD1Q9HA92 442 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 PCDHA4Q9UN74 947 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 FAN1Q9Y2M0 1017 aa30.04■■■□□ 2.4
CHFR-218ENST00000540963 DKC1O60832 514 aaKnown RBP eCLIP30.03■■■□□ 2.4
CHFR-218ENST00000540963 SRGAP1Q7Z6B7 1085 aa30.03■■■□□ 2.4
CHFR-218ENST00000540963 FAM193BQ96PV7 902 aaPredicted RBP30.03■■■□□ 2.4
CHFR-218ENST00000540963 SH2D3AQ9BRG2 576 aa30.03■■■□□ 2.4
CHFR-218ENST00000540963 COL4A3BPQ9Y5P4 624 aa30.03■■■□□ 2.4
CHFR-218ENST00000540963 B4GALT3O60512 393 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 DDHD2O94830 711 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 RPS6KB1P23443 525 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 HSPA4P34932 840 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 KSR1Q8IVT5 923 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 CNNM3Q8NE01 707 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 SLC7A3Q8WY07 619 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 UBN1Q9NPG3 1134 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 WNT16Q9UBV4 365 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 FBXL21Q9UKT6 434 aa30.02■■■□□ 2.4
CHFR-218ENST00000540963 TDP2O95551 362 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 SOD2P04179 222 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 NONOQ15233 471 aaKnown RBP eCLIP30.01■■■□□ 2.39
CHFR-218ENST00000540963 GALNT17Q6IS24 598 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 TRIM22Q8IYM9 498 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 DTWD2Q8NBA8 298 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 FEZF2Q8TBJ5 459 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 STAMQ92783 540 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 SNX14Q9Y5W7 946 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 GVINP1Q7Z2Y8 2422 aa30.01■■■□□ 2.39
CHFR-218ENST00000540963 M0R2N6 131 aa30■■■□□ 2.39
CHFR-218ENST00000540963 NRP1O14786 923 aa30■■■□□ 2.39
CHFR-218ENST00000540963 PI15O43692 258 aa30■■■□□ 2.39
CHFR-218ENST00000540963 C1RP00736 705 aa30■■■□□ 2.39
CHFR-218ENST00000540963 URODP06132 367 aa30■■■□□ 2.39
CHFR-218ENST00000540963 ADH1AP07327 375 aa30■■■□□ 2.39
CHFR-218ENST00000540963 PDIA3P30101 505 aaKnown RBP30■■■□□ 2.39
CHFR-218ENST00000540963 ANGPT1Q15389 498 aa30■■■□□ 2.39
CHFR-218ENST00000540963 ADSSL1Q8N142 457 aa30■■■□□ 2.39
CHFR-218ENST00000540963 DAGLBQ8NCG7 672 aa30■■■□□ 2.39
CHFR-218ENST00000540963 NXPE3Q969Y0 559 aa30■■■□□ 2.39
CHFR-218ENST00000540963 RPS6KC1Q96S38 1066 aa30■■■□□ 2.39
CHFR-218ENST00000540963 SEMA4AQ9H3S1 761 aa30■■■□□ 2.39
CHFR-218ENST00000540963 DCHS1Q96JQ0 3298 aa29.99■■■□□ 2.39
CHFR-218ENST00000540963 GAS2O43903 313 aaKnown RBP29.99■■■□□ 2.39
CHFR-218ENST00000540963 PAPLNO95428 1278 aa29.99■■■□□ 2.39
CHFR-218ENST00000540963 NCLP19338 710 aaKnown RBP29.99■■■□□ 2.39
CHFR-218ENST00000540963 QARSP47897 775 aaKnown RBP29.99■■■□□ 2.39
CHFR-218ENST00000540963 PCBP1Q15365 356 aaKnown RBP eCLIP29.99■■■□□ 2.39
CHFR-218ENST00000540963 BLIDQ8IZY5 108 aa29.99■■■□□ 2.39
CHFR-218ENST00000540963 SIX5Q8N196 739 aa29.99■■■□□ 2.39
CHFR-218ENST00000540963 PSPC1Q8WXF1 523 aaKnown RBP29.99■■■□□ 2.39
CHFR-218ENST00000540963 HERC2P3Q9BVR0 1158 aa29.99■■■□□ 2.39
CHFR-218ENST00000540963 DHX33Q9H6R0 707 aaKnown RBP29.99■■■□□ 2.39
CHFR-218ENST00000540963 WDR6Q9NNW5 1121 aaKnown RBP29.99■■■□□ 2.39
CHFR-218ENST00000540963 MTCL1Q9Y4B5 1905 aaKnown RBP29.98■■■□□ 2.39
CHFR-218ENST00000540963 INPPL1O15357 1258 aa29.98■■■□□ 2.39
CHFR-218ENST00000540963 SSBP05455 408 aaKnown RBP eCLIP29.98■■■□□ 2.39
CHFR-218ENST00000540963 PSMA5P28066 241 aa29.98■■■□□ 2.39
CHFR-218ENST00000540963 HOXA11P31270 313 aaPredicted RBP29.98■■■□□ 2.39
CHFR-218ENST00000540963 RFC5P40937 340 aa29.98■■■□□ 2.39
CHFR-218ENST00000540963 PPP2R5CQ13362 524 aa29.98■■■□□ 2.39
CHFR-218ENST00000540963 RNF168Q8IYW5 571 aaPredicted RBP29.98■■■□□ 2.39
CHFR-218ENST00000540963 HDAC7Q8WUI4 952 aa29.98■■■□□ 2.39
CHFR-218ENST00000540963 MAN1C1Q9NR34 630 aa29.98■■■□□ 2.39
CHFR-218ENST00000540963 EPS15L1Q9UBC2 864 aa29.98■■■□□ 2.39
CHFR-218ENST00000540963 DDX25Q9UHL0 483 aaKnown RBP29.98■■■□□ 2.39
CHFR-218ENST00000540963 ASAP2O43150 1006 aa29.97■■■□□ 2.39
CHFR-218ENST00000540963 UBXN11Q5T124 520 aa29.97■■■□□ 2.39
CHFR-218ENST00000540963 PLA2G4FQ68DD2 849 aa29.97■■■□□ 2.39
CHFR-218ENST00000540963 PRPF31Q8WWY3 499 aaKnown RBP29.97■■■□□ 2.39
CHFR-218ENST00000540963 FAM20AQ96MK3 541 aa29.97■■■□□ 2.39
CHFR-218ENST00000540963 DOCK8Q8NF50 2099 aa29.96■■■□□ 2.39
CHFR-218ENST00000540963 CCDC195A0A1B0GUA6 201 aa29.96■■■□□ 2.39
CHFR-218ENST00000540963 DEXIO95424 95 aa29.96■■■□□ 2.39
CHFR-218ENST00000540963 EFEMP2O95967 443 aa29.96■■■□□ 2.39
CHFR-218ENST00000540963 ID4P47928 161 aa29.96■■■□□ 2.39
CHFR-218ENST00000540963 AFF1P51825 1210 aaKnown RBP29.96■■■□□ 2.39
CHFR-218ENST00000540963 SSRP1Q08945 709 aaKnown RBP29.96■■■□□ 2.39
CHFR-218ENST00000540963 CENPQQ7L2Z9 268 aaPredicted RBP29.96■■■□□ 2.39
CHFR-218ENST00000540963 TCP11Q8WWU5 503 aa29.96■■■□□ 2.39
CHFR-218ENST00000540963 RXFP1Q9HBX9 757 aa29.96■■■□□ 2.39
CHFR-218ENST00000540963 NCOA5Q9HCD5 579 aaKnown RBP29.96■■■□□ 2.39
CHFR-218ENST00000540963 GLUD1P00367 558 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 POMCP01189 267 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 P4HBP07237 508 aaKnown RBP29.95■■■□□ 2.39
CHFR-218ENST00000540963 AK2P54819 239 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 CCT2P78371 535 aaKnown RBP29.95■■■□□ 2.39
CHFR-218ENST00000540963 COLGALT2Q8IYK4 626 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 GPR65Q8IYL9 337 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 CEP170P1Q96L14 293 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 MINDY3Q9H8M7 445 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 MARCH5Q9NX47 278 aa29.95■■■□□ 2.39
CHFR-218ENST00000540963 CLUHO75153 1309 aa29.95■■■□□ 2.38
CHFR-218ENST00000540963 TDRD15B5MCY1 1934 aaKnown RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms