RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 GCOM1H8Y6P7 765 aaPredicted RBP9.29□□□□□ -0.92
CHD4-208ENST00000540960 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
CHD4-208ENST00000540960 POLR2MP0CAP2 368 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 SPINK2P20155 84 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 CLK2P49760 499 aaKnown RBP9.29□□□□□ -0.92
CHD4-208ENST00000540960 GSDMDP57764 484 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 SNAP25P60880 206 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 CCDC6Q16204 474 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 JAKMIP3Q5VZ66 844 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 DRC7Q8IY82 874 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 C7orf31Q8N865 590 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 C4orf32Q8N8J7 132 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 DHX58Q96C10 678 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 TRERF1Q96PN7 1200 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 HNRNPABQ99729 332 aaKnown RBP9.29□□□□□ -0.92
CHD4-208ENST00000540960 PANK2Q9BZ23 570 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 TBC1D17Q9HA65 648 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 IMPACTQ9P2X3 320 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 DDX25Q9UHL0 483 aaKnown RBP9.29□□□□□ -0.92
CHD4-208ENST00000540960 PRR12Q9ULL5 1215 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 CA14Q9ULX7 337 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 DUSP12Q9UNI6 340 aa9.29□□□□□ -0.92
CHD4-208ENST00000540960 PATJQ8NI35 1801 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 DGKIO75912 1065 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 KIF20AO95235 890 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 CYP3A4P08684 503 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 TXNP10599 105 aaKnown RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 ALAS1P13196 640 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 HOXD8P13378 290 aaPredicted RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 SLC16A2P36021 539 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 SARSP49591 514 aaKnown RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 ALDH5A1P51649 535 aaPredicted RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 OAZ1P54368 228 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 SPAG1Q07617 926 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 TDGQ13569 410 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 KCNB1Q14721 858 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 IQCB1Q15051 598 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 LPAL2Q16609 132 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 SLC35G1Q2M3R5 365 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 HAUS3Q68CZ6 603 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 TTBK2Q6IQ55 1244 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 XRRA1Q6P2D8 792 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 CABP7Q86V35 215 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 TDRD5Q8NAT2 981 aaKnown RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 SPATA20Q8TB22 786 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 ENOX1Q8TC92 643 aaKnown RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 NOC3LQ8WTT2 800 aaKnown RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 SECISBP2LQ93073 1101 aaKnown RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 PAGE5Q96GU1 130 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 RANBP17Q9H2T7 1088 aaKnown RBP9.28□□□□□ -0.92
CHD4-208ENST00000540960 ADAM7Q9H2U9 754 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 DISC1Q9NRI5 854 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 LRWD1Q9UFC0 647 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 SERTAD1Q9UHV2 236 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 PCDHA5Q9Y5H7 936 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 MYH4Q9Y623 1939 aa9.28□□□□□ -0.92
CHD4-208ENST00000540960 GREB1LQ9C091 1923 aaPredicted RBP9.27□□□□□ -0.93
CHD4-208ENST00000540960 ESPNB1AK53 854 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 SPTLC1O15269 473 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 FGFR1OPO95684 399 aaKnown RBP9.27□□□□□ -0.93
CHD4-208ENST00000540960 TOP3BO95985 862 aaKnown RBP9.27□□□□□ -0.93
CHD4-208ENST00000540960 CTSHP09668 335 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 MUTP22033 750 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 CIITAP33076 1130 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 ZNF76P36508 570 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 SREBF1P36956 1147 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 PSEN2P49810 448 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 SETQ01105 290 aaPredicted RBP9.27□□□□□ -0.93
CHD4-208ENST00000540960 MORC3Q14149 939 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 TKFCQ3LXA3 575 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 Q4G0T1 1027 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 FILIP1LQ4L180 1135 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 PAN2Q504Q3 1202 aaKnown RBP9.27□□□□□ -0.93
CHD4-208ENST00000540960 NAALADL2Q58DX5 795 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 EARS2Q5JPH6 523 aaKnown RBP9.27□□□□□ -0.93
CHD4-208ENST00000540960 NSMFQ6X4W1 530 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 SV2BQ7L1I2 683 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 LUZP1Q86V48 1076 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 C12orf76Q8N812 135 aaPredicted RBP9.27□□□□□ -0.93
CHD4-208ENST00000540960 IGSF22Q8N9C0 903 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 ATRIPQ8WXE1 791 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 EPSTI1Q96J88 318 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 MBOAT7Q96N66 472 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 MTMR9Q96QG7 549 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 ANO3Q9BYT9 981 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 EPC1Q9H2F5 836 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 KCNK12Q9HB15 430 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 CYP26B1Q9NR63 512 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 PCDHA12Q9UN75 941 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 SIT1Q9Y3P8 196 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 DENND4AQ7Z401 1863 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 MIA3Q5JRA6 1907 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 TICRRQ7Z2Z1 1910 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 MYH15Q9Y2K3 1946 aa9.27□□□□□ -0.93
CHD4-208ENST00000540960 HECTD1Q9ULT8 2610 aa9.26□□□□□ -0.93
CHD4-208ENST00000540960 PVALEFA0A1B0GWK0 134 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms