RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SLC6A14Q9UN76 642 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 NR2E1Q9Y466 385 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 PCDHGC5Q9Y5F6 944 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 MRVI1Q9Y6F6 885 aa5.37□□□□□ -1.55
SNHG1-214ENST00000540865 MRPL42Q9Y6G3 142 aaKnown RBP5.37□□□□□ -1.55
SNHG1-214ENST00000540865 ADARB2-AS1A8MUL3 147 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 EREGO14944 169 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 NMT2O60551 498 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 HMMRO75330 724 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 RPLP1P05386 114 aaKnown RBP5.36□□□□□ -1.55
SNHG1-214ENST00000540865 PSAPP07602 524 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 SMIM10L2AP0DMW4 78 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 SMIM10L2BP0DMW5 78 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 TGFB3P10600 412 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 TOP1P11387 765 aaKnown RBP5.36□□□□□ -1.55
SNHG1-214ENST00000540865 RLBP1P12271 317 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 HOXB8P17481 243 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-214ENST00000540865 AMPD1P23109 780 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 DUSP6Q16828 381 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 HSDL1Q3SXM5 330 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 CELF3Q5SZQ8 465 aaKnown RBP5.36□□□□□ -1.55
SNHG1-214ENST00000540865 ANKRD54Q6NXT1 300 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 CHSY3Q70JA7 882 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 FAM35AQ86V20 835 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 VN1R2Q8NFZ6 395 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 OR13H1Q8NG92 308 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 KCNG4Q8TDN1 519 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 BTBD6Q96KE9 485 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 SPATA33Q96N06 139 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 RMDN3Q96TC7 470 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 TMEM47Q9BQJ4 181 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 RBCK1Q9BYM8 510 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 NAPBQ9H115 298 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 MFSD1Q9H3U5 465 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 RNPEPQ9H4A4 650 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 SUV39H2Q9H5I1 410 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 EHMT1Q9H9B1 1298 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 STARD13Q9Y3M8 1113 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 ABCB11O95342 1321 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 PLXNA3P51805 1871 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 GPR179Q6PRD1 2367 aa5.36□□□□□ -1.55
SNHG1-214ENST00000540865 OTOGLQ3ZCN5 2332 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 MICAL3Q7RTP6 2002 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 TRIP12Q14669 1992 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 BAZ2AQ9UIF9 1905 aaKnown RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 KMT2EQ8IZD2 1858 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 FRMPD2Q68DX3 1309 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 M0R2C6 588 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 PER2O15055 1255 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ORC4O43929 436 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 RANBP6O60518 1105 aaKnown RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 PHACTR2O75167 634 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 GGPS1O95749 300 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 CHRNA1P02708 482 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 LGALS2P05162 132 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 SNHG28P0DPA3 235 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 HSPD1P10809 573 aaKnown RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 GHRP10912 638 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 PDHBP11177 359 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ACPPP15309 386 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 EIF2AK2P19525 551 aaKnown RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 AOC1P19801 751 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ALAS2P22557 587 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 TECP42680 631 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ADAM17P78536 824 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 PLAURQ03405 335 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ZNF543Q08ER8 600 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 KCNC3Q14003 757 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 LPIN1Q14693 890 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ANGPT1Q15389 498 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 USH1GQ495M9 461 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 GPATCH4Q5T3I0 446 aaKnown RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ARHGEF16Q5VV41 709 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 TAF2Q6P1X5 1199 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 SYCE2Q6PIF2 218 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 FAM43BQ6ZT52 329 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-214ENST00000540865 NPAS4Q8IUM7 802 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 CCDC105Q8IYK2 499 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 KIAA2013Q8IYS2 634 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 RASGRP4Q8TDF6 673 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 MICAL1Q8TDZ2 1067 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 NUDT8Q8WV74 236 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 TBC1D5Q92609 795 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 NECTIN4Q96NY8 510 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 RTP3Q9BQQ7 232 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 USP26Q9BXU7 913 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 BCL11AQ9H165 835 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 PXMP2Q9NR77 195 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ECHDC1Q9NTX5 307 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 TCP11L1Q9NUJ3 509 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 SETD4Q9NVD3 440 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 COL20A1Q9P218 1284 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 ANAPC4Q9UJX5 808 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 PCDHB12Q9Y5F1 795 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 MYH8P13535 1937 aa5.35□□□□□ -1.55
SNHG1-214ENST00000540865 C1QTNF9BB2RNN3 333 aa5.34□□□□□ -1.55
SNHG1-214ENST00000540865 C2CD4DB7Z1M9 353 aa5.34□□□□□ -1.55
SNHG1-214ENST00000540865 FSCN2O14926 492 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms