RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 RSPH1Q8WYR4 309 aa18.16■□□□□ 0.5
TRIM65-203ENST00000540812 DYDC2Q96IM9 177 aa18.16■□□□□ 0.5
TRIM65-203ENST00000540812 NECTIN4Q96NY8 510 aa18.16■□□□□ 0.5
TRIM65-203ENST00000540812 IRAK3Q9Y616 596 aa18.16■□□□□ 0.5
TRIM65-203ENST00000540812 DKC1O60832 514 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRIM65-203ENST00000540812 DDHD2O94830 711 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 YWHABP31946 246 aaKnown RBP18.15■□□□□ 0.5
TRIM65-203ENST00000540812 RFC5P40937 340 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 MTHFRP42898 656 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 SPIRE1Q08AE8 756 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 CTTNQ14247 550 aaKnown RBP18.15■□□□□ 0.5
TRIM65-203ENST00000540812 EMC2Q15006 297 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 PTPN14Q15678 1187 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 NCAPH2Q6IBW4 605 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 SRGAP1Q7Z6B7 1085 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 MRPL10Q7Z7H8 261 aaKnown RBP18.15■□□□□ 0.5
TRIM65-203ENST00000540812 C4orf19Q8IY42 314 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 PGBD4Q96DM1 585 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 SMOC2Q9H3U7 446 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 DZANK1Q9NVP4 752 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 PPME1Q9Y570 386 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 KMT2EQ8IZD2 1858 aa18.15■□□□□ 0.5
TRIM65-203ENST00000540812 TBX3O15119 743 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 MARCH6O60337 910 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 PTPN5P54829 565 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 CYP4A11Q02928 519 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 FERMT3Q86UX7 667 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 URGCPQ8TCY9 931 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 RIPOR3Q96MK2 946 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 RSAD1Q9HA92 442 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 ORC3Q9UBD5 711 aaPredicted RBP18.14■□□□□ 0.49
TRIM65-203ENST00000540812 MYO10Q9HD67 2058 aa18.14■□□□□ 0.49
TRIM65-203ENST00000540812 CARNS1A5YM72 827 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 BRD1O95696 1058 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 POMCP01189 267 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 SSBP05455 408 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRIM65-203ENST00000540812 ASGR2P07307 311 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 XBP1P17861 261 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 AVPR2P30518 371 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 NR5A1Q13285 461 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 GIT2Q14161 759 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 XKR9Q5GH70 373 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 KIAA1841Q6NSI8 718 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 TMC5Q6UXY8 1006 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 RNF149Q8NC42 400 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 ZSWIM4Q9H7M6 989 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 XPNPEP1Q9NQW7 623 aa18.13■□□□□ 0.49
TRIM65-203ENST00000540812 SLITRK3O94933 977 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 FDPSP14324 419 aaKnown RBP18.12■□□□□ 0.49
TRIM65-203ENST00000540812 ATAT1Q5SQI0 421 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 OTUD6AQ7L8S5 288 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 TPH2Q8IWU9 490 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 EXOC8Q8IYI6 725 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 NECAB1Q8N987 351 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 SMG8Q8ND04 991 aaKnown RBP18.12■□□□□ 0.49
TRIM65-203ENST00000540812 TCP11Q8WWU5 503 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 TNFRSF25Q93038 417 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 KLHL5Q96PQ7 755 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 NAP1L4Q99733 375 aaKnown RBP18.12■□□□□ 0.49
TRIM65-203ENST00000540812 PRRX2Q99811 253 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 EIF2AQ9BY44 585 aaKnown RBP18.12■□□□□ 0.49
TRIM65-203ENST00000540812 RNF39Q9H2S5 420 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 LIMD1Q9UGP4 676 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 SORCS3Q9UPU3 1222 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 CNTNAP2Q9UHC6 1331 aa18.12■□□□□ 0.49
TRIM65-203ENST00000540812 NRP1O14786 923 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 GAS2O43903 313 aaKnown RBP18.11■□□□□ 0.49
TRIM65-203ENST00000540812 LILRB3O75022 631 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 LARGE1O95461 756 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 CNPP09543 421 aaKnown RBP18.11■□□□□ 0.49
TRIM65-203ENST00000540812 NCLP19338 710 aaKnown RBP18.11■□□□□ 0.49
TRIM65-203ENST00000540812 KRT2P35908 639 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 AK2P54819 239 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 PTENP60484 403 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 MTMR3Q13615 1198 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 CABP7Q86V35 215 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 UBALD2Q8IYN6 164 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 TDRD5Q8NAT2 981 aaKnown RBP18.11■□□□□ 0.49
TRIM65-203ENST00000540812 CPB2Q96IY4 423 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 FAM193BQ96PV7 902 aaPredicted RBP18.11■□□□□ 0.49
TRIM65-203ENST00000540812 MTRQ99707 1265 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 TMEM175Q9BSA9 504 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 FAM86C1Q9NVL1 165 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 MARCH5Q9NX47 278 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 DBR1Q9UK59 544 aaKnown RBP18.11■□□□□ 0.49
TRIM65-203ENST00000540812 FAN1Q9Y2M0 1017 aa18.11■□□□□ 0.49
TRIM65-203ENST00000540812 PRG3Q9Y2Y8 225 aaPredicted RBP18.11■□□□□ 0.49
TRIM65-203ENST00000540812 WNT7AO00755 349 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 ASAP2O43150 1006 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 TSPAN1O60635 241 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
TRIM65-203ENST00000540812 ALDH2P05091 517 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 CLCN4P51793 760 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 PPFIBP1Q86W92 1011 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 SLFN12Q8IYM2 578 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 ZDHHC14Q8IZN3 488 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 ASAP3Q8TDY4 903 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 GAD1Q99259 594 aa18.1■□□□□ 0.49
TRIM65-203ENST00000540812 EIF2AK1Q9BQI3 630 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms