RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SCN9AQ15858 1988 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 PODXLO00592 558 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
NPC1-202ENST00000540608 BCRP11274 1271 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 CTNNA2P26232 953 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 BFSP1Q12934 665 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 MYBPC2Q14324 1141 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 FUKQ8N0W3 1084 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 FBXO25Q8TCJ0 367 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 ZKSCAN4Q969J2 545 aaPredicted RBP13.27□□□□□ -0.29
NPC1-202ENST00000540608 ZNF622Q969S3 477 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPC1-202ENST00000540608 VTI1AQ96AJ9 217 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 ZNF317Q96PQ6 595 aaPredicted RBP13.27□□□□□ -0.29
NPC1-202ENST00000540608 NACC1Q96RE7 527 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
NPC1-202ENST00000540608 CD248Q9HCU0 757 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 GRHL1Q9NZI5 618 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 PCYOX1Q9UHG3 505 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 PFASO15067 1338 aa13.27□□□□□ -0.29
NPC1-202ENST00000540608 GGPS1O95749 300 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
NPC1-202ENST00000540608 MMP10P09238 476 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 CHN1P15882 459 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 PDE6BP35913 854 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 PRELPP51888 382 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 ABCB5Q2M3G0 1257 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 ODR4Q5SWX8 454 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 C6orf118Q5T5N4 469 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 SLC30A10Q6XR72 485 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 TEX2Q8IWB9 1127 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 PRELID2Q8N945 189 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 C18orf8Q96DM3 657 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 RPS6KC1Q96S38 1066 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 JPH2Q9BR39 696 aaPredicted RBP13.26□□□□□ -0.29
NPC1-202ENST00000540608 PARP2Q9UGN5 583 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 ASAP2O43150 1006 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 CHMP2AO43633 222 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 EXOC3O60645 756 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 LRRN2O75325 713 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 KRT13P13646 458 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 GPC5P78333 572 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 SLC29A2Q14542 456 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
NPC1-202ENST00000540608 STRIP1Q5VSL9 837 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 AADACL2Q6P093 401 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 CYB5D1Q6P9G0 228 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 CCDC50Q8IVM0 306 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 ATXN2LQ8WWM7 1075 aaKnown RBP13.26□□□□□ -0.29
NPC1-202ENST00000540608 TMEM109Q9BVC6 243 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 STRA6Q9BX79 667 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 ADAM7Q9H2U9 754 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 CTTNBP2NLQ9P2B4 639 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 RPTORQ8N122 1335 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 ECE2O60344 883 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 XRCC4Q13426 336 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 PARP9Q8IXQ6 854 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 CCDC197Q8NCU1 140 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 SLC20A1Q8WUM9 679 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 KRT35Q92764 455 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 HVCN1Q96D96 273 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 HOOK2Q96ED9 719 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 ZSWIM1Q9BR11 485 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 UBE2TQ9NPD8 197 aaPredicted RBP13.26□□□□□ -0.29
NPC1-202ENST00000540608 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 PCDHA3Q9Y5H8 950 aa13.26□□□□□ -0.29
NPC1-202ENST00000540608 TLDC2A0PJX2 215 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 CCT8L1PA6NM43 557 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 RGS16O15492 202 aaPredicted RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 DNAJC8O75937 253 aaPredicted RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 AGTP01019 485 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 GH2P01242 217 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 MMEP08473 750 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 MAP2K2P36507 400 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 RPL21P46778 160 aaKnown RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 PEX5P50542 639 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 ADCY2Q08462 1091 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 RPAINQ86UA6 219 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 SYCP3Q8IZU3 236 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 SPICE1Q8N0Z3 855 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 RDH13Q8NBN7 331 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 SGSM3Q96HU1 749 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 AZI2Q9H6S1 392 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 TDRD3Q9H7E2 651 aaKnown RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 HAUS2Q9NVX0 235 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 ZNF219Q9P2Y4 722 aaPredicted RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 A0A1W2PRG0 241 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 ALAS1P13196 640 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 IFI35P80217 286 aaPredicted RBP13.25□□□□□ -0.29
NPC1-202ENST00000540608 SNCBQ16143 134 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 PIGWQ7Z7B1 504 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 SELENOSQ9BQE4 189 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 SEMA4AQ9H3S1 761 aa13.25□□□□□ -0.29
NPC1-202ENST00000540608 WRAP73Q9P2S5 460 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms