RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 NLRP9Q7RTR0 991 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 HPS1Q92902 700 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 FNBP1Q96RU3 617 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 KLHL11Q9NVR0 708 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 GCNT3O95395 438 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 LDHCP07864 332 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 TOB1P50616 345 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 EIF4A1P60842 406 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 KRT17Q04695 432 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 THOC7Q6I9Y2 204 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 KLC3Q6P597 504 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 B3GNT6Q6ZMB0 384 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 FAM13CQ8NE31 585 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 NSL1Q96IY1 281 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 AGTPBP1Q9UPW5 1226 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 HPSEQ9Y251 543 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 AK5Q9Y6K8 562 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 SOS2Q07890 1332 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 URB2Q14146 1524 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 F5H423 210 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 CHMP2AO43633 222 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 SNX3O60493 162 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 PIAS1O75925 651 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 NEK3P51956 506 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 KHDC1Q4VXA5 237 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 RSPH3Q86UC2 560 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 TRPM2O94759 1503 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 NEURL1BA8MQ27 555 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 NAT1P18440 290 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 FAM83BQ5T0W9 1011 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 MYOCDQ8IZQ8 938 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 PWWP2AQ96N64 755 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 TLR10Q9BXR5 811 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 SLC13A1Q9BZW2 595 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 TRABDQ9H4I3 376 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 NOL6Q9H6R4 1146 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 DAPK2Q9UIK4 370 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 TRPC5Q9UL62 973 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 MYOM2P54296 1465 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 AFPP02771 609 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 SPATA31D3P0C874 917 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 MAGEA8P43361 318 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 EIF6P56537 245 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 CTTNQ14247 550 aaKnown RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 GCKRQ14397 625 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 SPATA31D4Q6ZUB0 917 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 JAMLQ86YT9 394 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 RUBCNQ92622 972 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
PBX1-212ENST00000540236 SLC12A4Q9UP95 1085 aa11.8□□□□□ -0.52
PBX1-212ENST00000540236 SHPRHQ149N8 1683 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 TRIM16LQ309B1 348 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 CERKLQ49MI3 558 aaPredicted RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 TTBK2Q6IQ55 1244 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 MARK2Q7KZI7 788 aaKnown RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 DDHD1Q8NEL9 900 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 OSBPL10Q9BXB5 764 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 CCPG1Q9ULG6 757 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 UNC13AQ9UPW8 1703 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 IL1RL1Q01638 556 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 ITGADQ13349 1161 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 LLGL2Q6P1M3 1020 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 YEATS2Q9ULM3 1422 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 ANTXR2P58335 489 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 TMEM53Q6P2H8 277 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 MB21D2Q8IYB1 491 aaPredicted RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 SH3TC2Q8TF17 1288 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 SH3GL1Q99961 368 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 RAB34Q9BZG1 259 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 SAP30BPQ9UHR5 308 aaKnown RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 PRELID1Q9Y255 219 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 SGK1O00141 431 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 OR6B1O95007 311 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 MRPS15P82914 257 aaKnown RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 CNGA2Q16280 664 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 BSPRYQ5W0U4 402 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 DHTKD1Q96HY7 919 aaPredicted RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 HERC5Q9UII4 1024 aaKnown RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 FOXD2O60548 495 aaPredicted RBP11.79□□□□□ -0.52
PBX1-212ENST00000540236 CCNE1P24864 410 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 TMPRSS15P98073 1019 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 ATP2A3Q93084 1043 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 DISC1Q9NRI5 854 aa11.79□□□□□ -0.52
PBX1-212ENST00000540236 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 KPNA1P52294 538 aaPredicted RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 HIC1Q14526 733 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 NAB2Q15742 525 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 LPCAT2Q7L5N7 544 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 IFNL3Q8IZI9 196 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms