RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TEDDM1Q5T9Z0 273 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 NUGGCQ68CJ6 796 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 ITPRIPL1Q6GPH6 555 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 POTEBQ6S5H4 581 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 LRRC43Q8N309 656 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 SNX19Q92543 992 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 ASB14A6NK59 587 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 EYA4O95677 639 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 ROR1Q01973 937 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 PPP6R3Q5H9R7 873 aaPredicted RBP6.9□□□□□ -1.31
LSAMP-207ENST00000539563 GRAMD1AQ96CP6 724 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 TAF1DQ9H5J8 278 aaPredicted RBP6.9□□□□□ -1.31
LSAMP-207ENST00000539563 TRIM45Q9H8W5 580 aaPredicted RBP6.9□□□□□ -1.31
LSAMP-207ENST00000539563 UBN2Q6ZU65 1347 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 FRMPD1Q5SYB0 1578 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 GYG2O15488 501 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 ATP1A3P13637 1013 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 GUCY2CP25092 1073 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 SLC1A1P43005 524 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 GPSM2P81274 684 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 GFPT1Q06210 699 aaPredicted RBP6.9□□□□□ -1.31
LSAMP-207ENST00000539563 SCN4BQ8IWT1 228 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 LRRC37BQ96QE4 947 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 LXNQ9BS40 222 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 L3MBTL1Q9Y468 752 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 USP32Q8NFA0 1604 aa6.9□□□□□ -1.31
LSAMP-207ENST00000539563 LRRC53A6NM62 1247 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 PTPN21Q16825 1174 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF394Q53GI3 561 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 HEATR6Q6AI08 1181 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 CDKL3Q8IVW4 592 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 GANCQ8TET4 914 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TTC17Q96AE7 1141 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 POLR3FQ9H1D9 316 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 SLITRK6Q9H5Y7 841 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 AGO2Q9UKV8 859 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 USP42Q9H9J4 1324 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 EEF1B2P24534 225 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 PSMC1P62191 440 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 LLGL1Q15334 1064 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 NEDD1Q8NHV4 660 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ARHGEF1Q92888 912 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 SNF8Q96H20 258 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF560Q96MR9 790 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 CAPN11Q9UMQ6 739 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 MMEP08473 750 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TAF11Q15544 211 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 EFHC2Q5JST6 749 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 KSR1Q8IVT5 923 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 SPATA33Q96N06 139 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 EML4Q9HC35 981 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 DLC1Q96QB1 1528 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 SPAG7O75391 227 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 RALAP11233 206 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 SDC4P31431 198 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ZBTB17Q13105 803 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 EPHA10Q5JZY3 1008 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 USP17L6PQ6QN14 398 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ST13P4Q8IZP2 240 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 AFG1LQ8WV93 481 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 PPP1R2P1Q96PQ5 205 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 KATNAL1Q9BW62 490 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 INTS2Q9H0H0 1204 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 GOLPH3LQ9H4A5 285 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TMEM260Q9NX78 707 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 POTEFA5A3E0 1075 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 POTEIP0CG38 1075 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 MKRN3Q13064 507 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 MXD4Q14582 209 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TTC23LQ6PF05 361 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 POTEGQ6S5H5 508 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 POTEEQ6S8J3 1075 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 LPAR1Q92633 364 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 MYCBPQ99417 103 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ELAC2Q9BQ52 826 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 CCSER1Q9C0I3 900 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 SUDS3Q9H7L9 328 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 SP110Q9HB58 689 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 PCDHA10Q9Y5I2 948 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 YWHABP31946 246 aaKnown RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ADCY1Q08828 1119 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 QRICH1Q2TAL8 776 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TADA2BQ86TJ2 420 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 CXorf38Q8TB03 319 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF512BQ96KM6 892 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TNIP3Q96KP6 325 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 POLR3CQ9BUI4 534 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TRIM54Q9BYV2 358 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 RPAP3Q9H6T3 665 aaPredicted RBP6.89□□□□□ -1.31
LSAMP-207ENST00000539563 USP31Q70CQ4 1352 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 TRIM49BA6NDI0 452 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 E5RI56 91 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 AP1B1Q10567 949 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 FAM182BQ5T319 152 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 CRAMP1Q96RY5 1269 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 NDE1Q9NXR1 346 aa6.89□□□□□ -1.31
LSAMP-207ENST00000539563 STXBP3O00186 592 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms