RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 A0A1B0GVL5 298 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 POLR2DO15514 142 aaKnown RBP17.38■□□□□ 0.37
RPAIN-206ENST00000539417 PRKCBP05771 671 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 PLS3P13797 630 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 PPP2R5AQ15172 486 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 NT5DC1Q5TFE4 455 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 EEF1DP3Q658K8 133 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 ZBTB8OSQ8IWT0 167 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 DDX12PQ92771 950 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 DNAJC19Q96DA6 116 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 FIZ1Q96SL8 496 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 TIPINQ9BVW5 301 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 PRDM12Q9H4Q4 367 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 KMT5AQ9NQR1 393 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 KCND2Q9NZV8 630 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 ARHGAP28Q9P2N2 729 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 MTUS1Q9ULD2 1270 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 LRFN2Q9ULH4 789 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 HES2Q9Y543 173 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 ATP6V1DQ9Y5K8 247 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 KIAA1671Q9BY89 1806 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 COL6A3P12111 3177 aa17.38■□□□□ 0.37
RPAIN-206ENST00000539417 STAG3L1P0CL83 205 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 CASP1P29466 404 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 AFF1P51825 1210 aaKnown RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 ZNF131P52739 623 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 FAM187BQ17R55 369 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 SV2BQ7L1I2 683 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 SMG8Q8ND04 991 aaKnown RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 TMEM161BQ8NDZ6 487 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 ARNTL2Q8WYA1 636 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 TRAIPQ9BWF2 469 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 C2orf40Q9H1Z8 148 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 ELAC1Q9H777 363 aaKnown RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 PRMT7Q9NVM4 692 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 DACT1Q9NYF0 836 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 PCDHB2Q9Y5E7 798 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 MRPL42Q9Y6G3 142 aaKnown RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 CNTNAP2Q9UHC6 1331 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 TMEM265A0A087WTH1 108 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 A0A1B0GUA9 196 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 KRT18P05783 430 aaKnown RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 PFKFB1P16118 471 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 DMP1Q13316 513 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 MAPK6Q16659 721 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 ADALQ6DHV7 355 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 AGMOQ6ZNB7 445 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 GRAMD1CQ8IYS0 662 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 MYLIPQ8WY64 445 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 CASD1Q96PB1 797 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 CDX2Q99626 313 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 NTPCRQ9BSD7 190 aaKnown RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-206ENST00000539417 GOLPH3LQ9H4A5 285 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 ZHX3Q9H4I2 956 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 PDZD7Q9H5P4 517 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 KCNH3Q9ULD8 1083 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 ODF2LQ9ULJ1 636 aa17.37■□□□□ 0.37
RPAIN-206ENST00000539417 ACKR2O00590 384 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 FAM13AO94988 1023 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 NPTXRO95502 500 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 CMA1P23946 247 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 NMT1P30419 496 aaKnown RBP17.36■□□□□ 0.37
RPAIN-206ENST00000539417 ERVK-21P61565 698 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 PRPF4BQ13523 1007 aaKnown RBP17.36■□□□□ 0.37
RPAIN-206ENST00000539417 BTG3Q14201 252 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-206ENST00000539417 ADGRE1Q14246 886 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 NOTUMQ6P988 496 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 MYCT1Q8N699 235 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 HELQQ8TDG4 1101 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 SPIRE2Q8WWL2 714 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 NXF3Q9H4D5 531 aaKnown RBP17.36■□□□□ 0.37
RPAIN-206ENST00000539417 C17orf75Q9HAS0 396 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 KBTBD4Q9NVX7 518 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 SERTAD1Q9UHV2 236 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-206ENST00000539417 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 IPPQ9Y573 584 aa17.36■□□□□ 0.37
RPAIN-206ENST00000539417 NLRC5Q86WI3 1866 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 COL4A4P53420 1690 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-206ENST00000539417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-206ENST00000539417 K7ERI5 159 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 ZNF623O75123 536 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 MAPTP10636 758 aaKnown RBP17.35■□□□□ 0.37
RPAIN-206ENST00000539417 AXLP30530 894 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 NDUFA8P51970 172 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 NCKAP1LP55160 1127 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 MRPL10Q7Z7H8 261 aaKnown RBP17.35■□□□□ 0.37
RPAIN-206ENST00000539417 SFR1Q86XK3 245 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 CMTR2Q8IYT2 770 aaKnown RBP17.35■□□□□ 0.37
RPAIN-206ENST00000539417 FIBCD1Q8N539 461 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 TARS2Q9BW92 718 aaKnown RBP17.35■□□□□ 0.37
RPAIN-206ENST00000539417 FGFBP2Q9BYJ0 223 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 CXCL16Q9H2A7 254 aa17.35■□□□□ 0.37
RPAIN-206ENST00000539417 IKZF4Q9H2S9 585 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms