RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 UBE2Q1Q7Z7E8 422 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PROSER1Q86XN7 944 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PDSS2Q86YH6 399 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 KIAA1958Q8N8K9 716 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 VPS37AQ8NEZ2 397 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 EAF2Q96CJ1 260 aaPredicted RBP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 MED15Q96RN5 788 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SOX7Q9BT81 388 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 AP5M1Q9H0R1 490 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 USP40Q9NVE5 1235 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.34□□□□□ -2.19
HIF1A-204ENST00000539097 DUSP13Q9UII6 198 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 INTUQ9ULD6 942 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 SIK3Q9Y2K2 1263 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 PCDHB1Q9Y5F3 818 aa1.34□□□□□ -2.19
HIF1A-204ENST00000539097 GRM6O15303 877 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 DGKIO75912 1065 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 ENDOD1O94919 500 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 GLP2RO95838 553 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 LTA4HP09960 611 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 PTPN1P18031 435 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 MANFP55145 182 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 ANTXR2P58335 489 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 CACNB2Q08289 660 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 SEPT2Q15019 361 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 MAPRE1Q15691 268 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 DCAF17Q5H9S7 520 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 FAM109BQ6ICB4 259 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 PGM2L1Q6PCE3 622 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 Q6ZVL8 140 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 CHPFQ8IZ52 775 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 TSPYL6Q8N831 410 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 FAM156AQ8NDB6 213 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 NLGN4YQ8NFZ3 816 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 SLC35G2Q8TBE7 412 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 IGDCC4Q8TDY8 1250 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 RABGGTAQ92696 567 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 SH3KBP1Q96B97 665 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 SLC7A6OSQ96CW6 309 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 C18orf8Q96DM3 657 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 TOE1Q96GM8 510 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 DMRTA2Q96SC8 542 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 AMNQ9BXJ7 453 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 QRSL1Q9H0R6 528 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 LUC7LQ9NQ29 371 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 STARD7Q9NQZ5 370 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM74BQ9NUR3 256 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 UCKL1Q9NWZ5 548 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 CLDND1Q9NY35 253 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 KCMF1Q9P0J7 381 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 MSRAQ9UJ68 235 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 YBX2Q9Y2T7 364 aaKnown RBP1.34□□□□□ -2.2
HIF1A-204ENST00000539097 DAAM1Q9Y4D1 1078 aa1.34□□□□□ -2.2
HIF1A-204ENST00000539097 GOLIM4O00461 696 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 PMM2O15305 246 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 AOAHP28039 575 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SLC6A9P48067 706 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CACNB3P54284 484 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 RAD23BP54727 409 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 MGAT2Q10469 447 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ADAM9Q13443 819 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM132BQ14DG7 1078 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 FSCN1Q16658 493 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TRIM68Q6AZZ1 485 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 KRT28Q7Z3Y7 464 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TTC7BQ86TV6 843 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CREG2Q8IUH2 290 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 KLHL36Q8N4N3 616 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 LZTR1Q8N653 840 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ASB15Q8WXK1 588 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 AUTS2Q8WXX7 1259 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 RUBCNQ92622 972 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 GDF15Q99988 308 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 NUDT22Q9BRQ3 303 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 GREM2Q9H772 168 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ATP6V0A4Q9HBG4 840 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 XPNPEP3Q9NQH7 507 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 DLL4Q9NR61 685 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CATSPERZQ9NTU4 200 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TRMT13Q9NUP7 481 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 KLHL11Q9NVR0 708 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 PPP1R14DQ9NXH3 145 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SAGE1Q9NXZ1 904 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TBC1D30Q9Y2I9 924 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 IPPQ9Y573 584 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 RPS6KL1Q9Y6S9 549 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SSU72P8A0A1W2PR75 194 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 PRSS38A1L453 326 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 XPOTO43592 962 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 HIP1RO75146 1068 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM127O75204 238 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 DDX58O95786 925 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 LDHAP00338 332 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 PFKMP08237 780 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 FURINP09958 794 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SRGNP10124 158 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 NCAM1P13591 858 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 AGXTP21549 392 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms