RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 INO80B-WBP1J3KQ70 363 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 TGFB1I1O43294 461 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 EXOC3O60645 756 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 ERLIN2O94905 339 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 VTNP04004 478 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 HOXD13P35453 343 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 CYP2J2P51589 502 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 PPP2R3AQ06190 1150 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 NCBP1Q09161 790 aaKnown RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 KCNA1Q09470 495 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 LHX8Q68G74 356 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 LRRC55Q6ZSA7 311 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 APBB1IPQ7Z5R6 666 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 SLC9A9Q8IVB4 645 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 ZC3H3Q8IXZ2 948 aaKnown RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 NME8Q8N427 588 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 GCOM2Q9BZD3 368 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 INO80BQ9C086 356 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 HSD3B7Q9H2F3 369 aa16.87■□□□□ 0.29
VAMP1-207ENST00000539047 PAK6Q9NQU5 681 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 PRMT7Q9NVM4 692 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 LIMA1Q9UHB6 759 aaKnown RBP16.87■□□□□ 0.29
VAMP1-207ENST00000539047 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
VAMP1-207ENST00000539047 DNM1LO00429 736 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 N4BP3O15049 544 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 CLIC2O15247 247 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 KRT13P13646 458 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 GARTP22102 1010 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 CDC25BP30305 580 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 HOXC8P31273 242 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 DEKP35659 375 aaKnown RBP16.86■□□□□ 0.29
VAMP1-207ENST00000539047 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
VAMP1-207ENST00000539047 NLRP11P59045 1033 aaKnown RBP16.86■□□□□ 0.29
VAMP1-207ENST00000539047 PTENP60484 403 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 ITGA7Q13683 1181 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 KRT31Q15323 416 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 FKBP15Q5T1M5 1219 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 ZPBP2Q6X784 338 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 USP37Q86T82 979 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 KIAA0319LQ8IZA0 1049 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 POMGNT1Q8WZA1 660 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 ZBTB10Q96DT7 871 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 TUBGCP2Q9BSJ2 902 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 TAB2Q9NYJ8 693 aa16.86■□□□□ 0.29
VAMP1-207ENST00000539047 ARMCX3Q9UH62 379 aaPredicted RBP16.86■□□□□ 0.29
VAMP1-207ENST00000539047 A0A087WZ62 844 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 A0A1W2PQ45 241 aaPredicted RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 A0A1W2PQY0 241 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 TREHO43280 583 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 MYCP01106 439 aaPredicted RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 PIGRP01833 764 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 PTMAP06454 111 aaKnown RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 GPC3P51654 580 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 COPB1P53618 953 aaKnown RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 ADAM17P78536 824 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 PRPF4BQ13523 1007 aaKnown RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 PCBP1Q15365 356 aaKnown RBP eCLIP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 MAN2A1Q16706 1144 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 FRMD5Q7Z6J6 570 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 IFNLR1Q8IU57 520 aaPredicted RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 FAM186BQ8IYM0 893 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 DEFB118Q96PH6 123 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 PPP1R16BQ96T49 567 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 FDXACB1Q9BRP7 624 aaPredicted RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 NOC4LQ9BVI4 516 aaKnown RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 XPO4Q9C0E2 1151 aaKnown RBP16.85■□□□□ 0.29
VAMP1-207ENST00000539047 CCDC113Q9H0I3 377 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 PHF24Q9UPV7 400 aa16.85■□□□□ 0.29
VAMP1-207ENST00000539047 LDHAP00338 332 aaKnown RBP16.84■□□□□ 0.29
VAMP1-207ENST00000539047 GJB1P08034 283 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
VAMP1-207ENST00000539047 MARSP56192 900 aaKnown RBP16.84■□□□□ 0.29
VAMP1-207ENST00000539047 PTGISQ16647 500 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 RUFY4Q6ZNE9 571 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 TMEM174Q8WUU8 243 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 DNAJB3Q8WWF6 145 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 EEF2KMTQ96G04 330 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 TCHPQ9BT92 498 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 HSPBP1Q9NZL4 362 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 ANKFY1Q9P2R3 1169 aa16.84■□□□□ 0.29
VAMP1-207ENST00000539047 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.84■□□□□ 0.29
VAMP1-207ENST00000539047 A0A1B0GTH6 734 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 ACKR2O00590 384 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 MAPK13O15264 365 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 TOM1L1O75674 476 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 MBTD1Q05BQ5 628 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 KIZQ2M2Z5 673 aa16.83■□□□□ 0.28
VAMP1-207ENST00000539047 GDF6Q6KF10 455 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms