RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ARVCFO00192 962 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 MGST3O14880 152 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 GSTA4O15217 222 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 DAPK3O43293 454 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 HOXA3O43365 443 aaPredicted RBP2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 C1QL1O75973 258 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 ATF4P18848 351 aaPredicted RBP2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 MPLP40238 635 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 SLC6A3Q01959 620 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 BRAPQ7Z569 592 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 SH2D3CQ8N5H7 860 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 OR52N2Q8NGI0 321 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 C14orf93Q9H972 538 aaKnown RBP2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 POLR3BQ9NW08 1133 aaPredicted RBP2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 ZNF70Q9UC06 446 aaPredicted RBP2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 HDAC5Q9UQL6 1122 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 PCDHA9Q9Y5H5 950 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 CHD1O14646 1710 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 MAGI1Q96QZ7 1491 aaPredicted RBP2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 PRXQ9BXM0 1461 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 CUL7Q14999 1698 aa2.95□□□□□ -1.94
CBX3P4-201ENST00000538909 SOGA1O94964 1423 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 NUP160Q12769 1436 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 SHROOM2Q13796 1616 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 IQCA1LA6NCM1 817 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 CGB1A6NKQ9 187 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 DNAJC6O75061 913 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 ITGAMP11215 1152 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 DDX6P26196 483 aaKnown RBP eCLIP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 KIR2DL3P43628 341 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 LACTBP83111 547 aaPredicted RBP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 HDLBPQ00341 1268 aaKnown RBP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 KLHL22Q53GT1 634 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 ABHD17BQ5VST6 288 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 ZNF425Q6IV72 752 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 RTN4RL1Q86UN2 441 aaPredicted RBP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 GLB1L3Q8NCI6 653 aaPredicted RBP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 FOXRED1Q96CU9 486 aaPredicted RBP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 DCLRE1CQ96SD1 692 aaKnown RBP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 FOXB1Q99853 325 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 SEMA4GQ9NTN9 838 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 DKK2Q9UBU2 259 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 CHST2Q9Y4C5 530 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 B3GALT1Q9Y5Z6 326 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 AQRO60306 1485 aaKnown RBP eCLIP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 GRIN2BQ13224 1484 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 GAPVD1Q14C86 1478 aa2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 ARHGEF17Q96PE2 2063 aaPredicted RBP2.94□□□□□ -1.94
CBX3P4-201ENST00000538909 RUSC2Q8N2Y8 1516 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 SYNJ2O15056 1496 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 SNAPC4Q5SXM2 1469 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 GAGE12BA1L429 117 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 GAGE12HA6NDE8 117 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 TRIM38O00635 465 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 SPDEFO95238 335 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 SDHAP31040 664 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 BMPR1AP36894 532 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 RANGAP1P46060 587 aaPredicted RBP2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 SIM1P81133 766 aaPredicted RBP2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 NHLH2Q02577 135 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 ROM1Q03395 351 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 FAM83AQ86UY5 434 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 XYLT1Q86Y38 959 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 PLXDC1Q8IUK5 500 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 CELF2-AS1Q8N7Q2 184 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 SPATA3Q8NHX4 192 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 DDB2Q92466 427 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 DLG3Q92796 817 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 ADAM2Q99965 735 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 LSM14BQ9BX40 385 aaKnown RBP2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 ING3Q9NXR8 418 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 RNF181Q9P0P0 153 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 KIF21BO75037 1637 aa2.93□□□□□ -1.94
CBX3P4-201ENST00000538909 CEP170Q5SW79 1584 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 GRIN2AQ12879 1464 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 HIP1RO75146 1068 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 CBSLP0DN79 551 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 EGR2P11161 476 aaPredicted RBP2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 ZSCAN20P17040 1043 aaPredicted RBP2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 CBSP35520 551 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 CASRP41180 1078 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 BLOC1S1P78537 153 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 PDCD4Q53EL6 469 aaKnown RBP2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 SLFN12LQ6IEE8 588 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 CRELD2Q6UXH1 353 aaPredicted RBP2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 OR5M3Q8NGP4 307 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 SLC9A6Q92581 669 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 PTPRN2Q92932 1015 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 KLK15Q9H2R5 256 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 SPON1Q9HCB6 807 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 KMT5AQ9NQR1 393 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 ACSS2Q9NR19 701 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 KCMF1Q9P0J7 381 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 COQ6Q9Y2Z9 468 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 FHAD1B1AJZ9 1412 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 EEA1Q15075 1411 aa2.92□□□□□ -1.94
CBX3P4-201ENST00000538909 TDRD9Q8NDG6 1382 aaKnown RBP2.91□□□□□ -1.94
CBX3P4-201ENST00000538909 SLC12A8A0AV02 714 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms