RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PLCB1Q9NQ66 1216 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 SMARCAL1Q9NZC9 954 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 AIPL1Q9NZN9 384 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 ANKFY1Q9P2R3 1169 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 IGKV6D-21A0A0A0MT36 114 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 TADA3O75528 432 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 KLRC1P26715 233 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 CHMP4BP1P59074 171 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 IRX5P78411 483 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-205ENST00000538545 NEDD9Q14511 834 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 MCPH1Q8NEM0 835 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 SEMA4DQ92854 862 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 HINFPQ9BQA5 517 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 PI4K2AQ9BTU6 479 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 TARS2Q9BW92 718 aaKnown RBP15.37■□□□□ 0.05
ACTN1-205ENST00000538545 GPR88Q9GZN0 384 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 TMEM117Q9H0C3 514 aa15.37■□□□□ 0.05
ACTN1-205ENST00000538545 DHX33Q9H6R0 707 aaKnown RBP15.37■□□□□ 0.05
ACTN1-205ENST00000538545 SRGAP2CP0DJJ0 459 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 ADCYAP1R1P41586 468 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 CELF3Q5SZQ8 465 aaKnown RBP15.36■□□□□ 0.05
ACTN1-205ENST00000538545 FBXO38Q6PIJ6 1188 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 PALB2Q86YC2 1186 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 IFT74Q96LB3 600 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 EHD2Q9NZN4 543 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 PACSIN2Q9UNF0 486 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-205ENST00000538545 EVI5O60447 810 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 TUBB4AP04350 444 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 JAM2P57087 298 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-205ENST00000538545 CCDC62Q6P9F0 684 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 GOLGA5Q8TBA6 731 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 SECISBP2LQ93073 1101 aaKnown RBP15.36■□□□□ 0.05
ACTN1-205ENST00000538545 NTPCRQ9BSD7 190 aaKnown RBP15.36■□□□□ 0.05
ACTN1-205ENST00000538545 EDEM3Q9BZQ6 932 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 RNPEPQ9H4A4 650 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 ST6GALNAC4Q9H4F1 302 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 UBE2TQ9NPD8 197 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-205ENST00000538545 ARHGAP28Q9P2N2 729 aa15.36■□□□□ 0.05
ACTN1-205ENST00000538545 LRRIQ3A6PVS8 624 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 FOXN3O00409 490 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 USP8P40818 1118 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 CAPSQ13938 189 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 TMEM130Q8N3G9 435 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 AZI2Q9H6S1 392 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 CPA4Q9UI42 421 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 F8VZ95 297 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 NLRP11P59045 1033 aaKnown RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 AMPD2Q01433 879 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 SLC18A3Q16572 532 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 KIAA0753Q2KHM9 967 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 INTS8Q75QN2 995 aaKnown RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 PRPF31Q8WWY3 499 aaKnown RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 UBXN4Q92575 508 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 IQCDQ96DY2 449 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 MROH8Q9H579 483 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 CDC23Q9UJX2 597 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 SSU72P8A0A1W2PR75 194 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 ZBTB42B2RXF5 422 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 DKC1O60832 514 aaKnown RBP eCLIP15.35■□□□□ 0.051e-7■■■■■ 54.2
ACTN1-205ENST00000538545 LCA5LO95447 670 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 ZNF286BP0CG31 522 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 CETPP11597 493 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 ZSCAN20P17040 1043 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 TARBP2Q15633 366 aaKnown RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 GLYCTKQ8IVS8 523 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 PDCL2Q8N4E4 241 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 SEPT11Q9NVA2 429 aaKnown RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 APEX2Q9UBZ4 518 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 CHORDC1Q9UHD1 332 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-205ENST00000538545 PLXNA1Q9UIW2 1896 aa15.35■□□□□ 0.05
ACTN1-205ENST00000538545 MATR3P43243 847 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■■■■□ 22.4
ACTN1-205ENST00000538545 LIG4P49917 911 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 MXI1P50539 228 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 CLCN3P51790 818 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 MRPS25P82663 173 aaKnown RBP15.34■□□□□ 0.05
ACTN1-205ENST00000538545 ALCAMQ13740 583 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 PRAMEF19Q5SWL8 479 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 SPRYD7Q5W111 196 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 DEPTORQ8TB45 409 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 TAS1R2Q8TE23 839 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 PARD3BQ8TEW8 1205 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 SPIRE2Q8WWL2 714 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 TIPINQ9BVW5 301 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 PNMA3Q9UL41 463 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 MYO6Q9UM54 1294 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 K7ERI5 159 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 TGFB3P10600 412 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 GTF2A2P52657 109 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 HUNKP57058 714 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 ZBTB33Q86T24 672 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 METTL13Q8N6R0 699 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 C2orf69Q8N8R5 385 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 LNX1Q8TBB1 728 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-205ENST00000538545 SLC20A1Q8WUM9 679 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 DHX38Q92620 1227 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms