RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TMEM117Q9H0C3 514 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 ISCUQ9H1K1 167 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 ANKRD62A6NC57 917 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 MXI1P50539 228 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 JAK3P52333 1124 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 NCKAP1LP55160 1127 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 PRPF4BQ13523 1007 aaKnown RBP26.94■■□□□ 1.9
RAB40C-204ENST00000538492 NAA35Q5VZE5 725 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 KCTD16Q68DU8 428 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 ANO5Q75V66 913 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 WHAMMQ8TF30 809 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 CCDC127Q96BQ5 260 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 RNF146Q9NTX7 359 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 HACL1Q9UJ83 578 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 ANKRD63C9JTQ0 380 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 RPS6KA5O75582 802 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 FGGP02679 453 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 MAP2K1Q02750 393 aaPredicted RBP26.94■■□□□ 1.9
RAB40C-204ENST00000538492 PIK3R5Q8WYR1 880 aa26.94■■□□□ 1.9
RAB40C-204ENST00000538492 RGS17Q9UGC6 210 aaPredicted RBP26.94■■□□□ 1.9
RAB40C-204ENST00000538492 ADSSP30520 456 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 ZNF280AP59817 542 aaPredicted RBP26.93■■□□□ 1.9
RAB40C-204ENST00000538492 KRT76Q01546 638 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 DCAF12L1Q5VU92 463 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 MICALL2Q8IY33 904 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 ZKSCAN4Q969J2 545 aaPredicted RBP26.93■■□□□ 1.9
RAB40C-204ENST00000538492 ST6GALNAC4Q9H4F1 302 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 ZNF233A6NK53 670 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 IVLP07476 585 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 ECHS1P30084 290 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 SKIDA1Q1XH10 827 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 RPUSD2Q8IZ73 545 aaKnown RBP26.93■■□□□ 1.9
RAB40C-204ENST00000538492 ACP6Q9NPH0 428 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 CHORDC1Q9UHD1 332 aaPredicted RBP26.93■■□□□ 1.9
RAB40C-204ENST00000538492 DAAM1Q9Y4D1 1078 aa26.93■■□□□ 1.9
RAB40C-204ENST00000538492 CCDC188H7C350 402 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 DDX3YO15523 660 aaKnown RBP26.92■■□□□ 1.9
RAB40C-204ENST00000538492 FTLP02792 175 aaPredicted RBP26.92■■□□□ 1.9
RAB40C-204ENST00000538492 SFNP31947 248 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 NPTX2P47972 431 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 SNRNP35Q16560 246 aaKnown RBP26.92■■□□□ 1.9
RAB40C-204ENST00000538492 PRAMEF18Q5VWM3 479 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 ADAT2Q7Z6V5 191 aaKnown RBP26.92■■□□□ 1.9
RAB40C-204ENST00000538492 SH2D3CQ8N5H7 860 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 TMEM174Q8WUU8 243 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 POP1Q99575 1024 aaKnown RBP26.92■■□□□ 1.9
RAB40C-204ENST00000538492 TBX20Q9UMR3 447 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 NR2E1Q9Y466 385 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 P4HA2O15460 535 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 SP4Q02446 784 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 DALRD3Q5D0E6 543 aaKnown RBP26.92■■□□□ 1.9
RAB40C-204ENST00000538492 PPM1KQ8N3J5 372 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 MREGQ8N565 214 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 TMEM161BQ8NDZ6 487 aa26.92■■□□□ 1.9
RAB40C-204ENST00000538492 CELF4Q9BZC1 486 aaKnown RBP26.92■■□□□ 1.9
RAB40C-204ENST00000538492 TTC19Q6DKK2 380 aaPredicted RBP26.91■■□□□ 1.9
RAB40C-204ENST00000538492 TELO2Q9Y4R8 837 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 SGPL1O95470 568 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 DMP1Q13316 513 aaPredicted RBP26.91■■□□□ 1.9
RAB40C-204ENST00000538492 ZNF211Q13398 564 aaPredicted RBP26.91■■□□□ 1.9
RAB40C-204ENST00000538492 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
RAB40C-204ENST00000538492 NLRX1Q86UT6 975 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 ELMO3Q96BJ8 720 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 IWS1Q96ST2 819 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 TIPINQ9BVW5 301 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 MOV10L1Q9BXT6 1211 aaKnown RBP26.91■■□□□ 1.9
RAB40C-204ENST00000538492 NEUROG2Q9H2A3 272 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 ANKEF1Q9NU02 776 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 PPP1R1BQ9UD71 204 aaPredicted RBP26.91■■□□□ 1.9
RAB40C-204ENST00000538492 GJA3Q9Y6H8 435 aa26.91■■□□□ 1.9
RAB40C-204ENST00000538492 DENND3A2RUS2 1198 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 TTI1O43156 1089 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 SORBS3O60504 671 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 NR3C2P08235 984 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 CNGA1P29973 690 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 GMPSP49915 693 aaPredicted RBP26.9■■□□□ 1.9
RAB40C-204ENST00000538492 SMTNP53814 917 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 SNRNP48Q6IEG0 339 aaKnown RBP26.9■■□□□ 1.9
RAB40C-204ENST00000538492 BSNDQ8WZ55 320 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 CTTNBP2NLQ9P2B4 639 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 GABBR1Q9UBS5 961 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 NFKBIEO00221 500 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 BACE1P56817 501 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 CUL1Q13616 776 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 SEMA4DQ92854 862 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 PCDHA10Q9Y5I2 948 aa26.9■■□□□ 1.9
RAB40C-204ENST00000538492 KIAA1217Q5T5P2 1943 aa26.89■■□□□ 1.9
RAB40C-204ENST00000538492 COL11A1P12107 1806 aaPredicted RBP26.89■■□□□ 1.9
RAB40C-204ENST00000538492 SHOX2O60902 331 aaPredicted RBP26.89■■□□□ 1.9
RAB40C-204ENST00000538492 VSIG10LQ86VR7 867 aa26.89■■□□□ 1.9
RAB40C-204ENST00000538492 SAMD3Q8N6K7 520 aa26.89■■□□□ 1.9
RAB40C-204ENST00000538492 CEP170P1Q96L14 293 aa26.89■■□□□ 1.9
RAB40C-204ENST00000538492 RNPC3Q96LT9 517 aaKnown RBP26.89■■□□□ 1.9
RAB40C-204ENST00000538492 KMT5AQ9NQR1 393 aa26.89■■□□□ 1.9
RAB40C-204ENST00000538492 TMOD4Q9NZQ9 345 aa26.89■■□□□ 1.9
RAB40C-204ENST00000538492 DAPK3O43293 454 aa26.89■■□□□ 1.89
RAB40C-204ENST00000538492 CCND2P30279 289 aa26.89■■□□□ 1.89
RAB40C-204ENST00000538492 COPB2P35606 906 aa26.89■■□□□ 1.89
RAB40C-204ENST00000538492 KREMEN1Q96MU8 473 aa26.89■■□□□ 1.89
RAB40C-204ENST00000538492 PCDHB18PQ96TA0 734 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms