RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 NR1I3Q14994 352 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 MAPK6Q16659 721 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 NBPF20Q3BBV1 942 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 SLC9C1Q4G0N8 1177 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 CEP135Q66GS9 1140 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 LHX8Q68G74 356 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 ZPBP2Q6X784 338 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 TRIM59Q8IWR1 403 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 DRC7Q8IY82 874 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 KIAA0319LQ8IZA0 1049 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 XXYLT1Q8NBI6 393 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 SH3TC2Q8TF17 1288 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
DDB1-209ENST00000537877 VPS16Q9H269 839 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 IKZF4Q9H2S9 585 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 ARMCX3Q9UH62 379 aaPredicted RBP13.51□□□□□ -0.25
DDB1-209ENST00000537877 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
DDB1-209ENST00000537877 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 EXOC3O60645 756 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 AKAP3O75969 853 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 VTNP04004 478 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 GJB1P08034 283 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 GPC3P51654 580 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 ACLYP53396 1101 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 PTPN11Q06124 597 aaPredicted RBP13.5□□□□□ -0.25
DDB1-209ENST00000537877 FAM187BQ17R55 369 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 SLFN12LQ6IEE8 588 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 SLC39A4Q6P5W5 647 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 FAM186BQ8IYM0 893 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 ARRDC4Q8NCT1 418 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 CBWD1Q9BRT8 395 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 MRPL4Q9BYD3 311 aaKnown RBP13.5□□□□□ -0.25
DDB1-209ENST00000537877 FZD8Q9H461 694 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 PRMT7Q9NVM4 692 aaPredicted RBP13.5□□□□□ -0.25
DDB1-209ENST00000537877 HSPBP1Q9NZL4 362 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 IMPACTQ9P2X3 320 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 STYXL1Q9Y6J8 313 aa13.5□□□□□ -0.25
DDB1-209ENST00000537877 A0A087WZ62 844 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 A0A1W2PQC6 194 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 TISP43B9A030 160 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 TREHO43280 583 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
DDB1-209ENST00000537877 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
DDB1-209ENST00000537877 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
DDB1-209ENST00000537877 PBX1P40424 430 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 CASP4P49662 377 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 MBTD1Q05BQ5 628 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 HIC1Q14526 733 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 VWA3BQ502W6 1294 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 FKBP15Q5T1M5 1219 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 CTU1Q7Z7A3 348 aaKnown RBP13.49□□□□□ -0.25
DDB1-209ENST00000537877 NME8Q8N427 588 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 NLRP7Q8WX94 980 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 SCLT1Q96NL6 688 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 FDXACB1Q9BRP7 624 aaPredicted RBP13.49□□□□□ -0.25
DDB1-209ENST00000537877 NDST4Q9H3R1 872 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 IFT122Q9HBG6 1241 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 KIAA1586Q9HCI6 787 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 PAK6Q9NQU5 681 aaPredicted RBP13.49□□□□□ -0.25
DDB1-209ENST00000537877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.49□□□□□ -0.25
DDB1-209ENST00000537877 ITIH6Q6UXX5 1313 aa13.49□□□□□ -0.25
DDB1-209ENST00000537877 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 INO80B-WBP1J3KQ70 363 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 PES1O00541 588 aaKnown RBP13.48□□□□□ -0.25
DDB1-209ENST00000537877 ACKR2O00590 384 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 TEX33O43247 280 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 ADSSP30520 456 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
DDB1-209ENST00000537877 UBXN1Q04323 297 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 ENPEPQ07075 957 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 PCBP1Q15365 356 aaKnown RBP eCLIP13.48□□□□□ -0.25
DDB1-209ENST00000537877 FAM47CQ5HY64 1035 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 RUFY4Q6ZNE9 571 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 INTS8Q75QN2 995 aaKnown RBP13.48□□□□□ -0.25
DDB1-209ENST00000537877 TMC6Q7Z403 805 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 SPC24Q8NBT2 197 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 BORCS6Q96GS4 357 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 FBXL18Q96ME1 805 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 GLT1D1Q96MS3 346 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 TARS2Q9BW92 718 aaKnown RBP13.48□□□□□ -0.25
DDB1-209ENST00000537877 INO80BQ9C086 356 aaPredicted RBP13.48□□□□□ -0.25
DDB1-209ENST00000537877 FAM49AQ9H0Q0 323 aaPredicted RBP13.48□□□□□ -0.25
DDB1-209ENST00000537877 UNC93B1Q9H1C4 597 aa13.48□□□□□ -0.25
DDB1-209ENST00000537877 CNTNAP2Q9UHC6 1331 aa13.47□□□□□ -0.25
DDB1-209ENST00000537877 TOM1L1O75674 476 aa13.47□□□□□ -0.25
DDB1-209ENST00000537877 LDHAP00338 332 aaKnown RBP13.47□□□□□ -0.25
DDB1-209ENST00000537877 EDN1P05305 212 aa13.47□□□□□ -0.25
DDB1-209ENST00000537877 KRT13P13646 458 aa13.47□□□□□ -0.25
DDB1-209ENST00000537877 GSDMDP57764 484 aa13.47□□□□□ -0.25
DDB1-209ENST00000537877 BFSP1Q12934 665 aa13.47□□□□□ -0.25
DDB1-209ENST00000537877 PRPF4BQ13523 1007 aaKnown RBP13.47□□□□□ -0.25
DDB1-209ENST00000537877 GDF6Q6KF10 455 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms