RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 KIF20AO95235 890 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 EDN1P05305 212 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 CD44P16070 742 aaKnown RBP26.64■■□□□ 1.85
HMGA2-208ENST00000537429 CYP2C18P33260 490 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 TYRO3Q06418 890 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 LPIN1Q14693 890 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 FAM228AQ86W67 206 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 PRIMPOLQ96LW4 560 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 ACCSQ96QU6 501 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 TANC1Q9C0D5 1861 aa26.64■■□□□ 1.85
HMGA2-208ENST00000537429 ACKR2O00590 384 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 RPS6KA5O75582 802 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 TIMP1P01033 207 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 GHRP10912 638 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 RAG1P15918 1043 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 FGFR4P22455 802 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 PPP1R2P41236 205 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 CCL23P55773 120 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 GPNMBQ14956 572 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 TMEM206Q9H813 350 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 AGO3Q9H9G7 860 aaKnown RBP26.63■■□□□ 1.85
HMGA2-208ENST00000537429 ANO10Q9NW15 660 aa26.63■■□□□ 1.85
HMGA2-208ENST00000537429 PARNO95453 639 aaKnown RBP26.62■■□□□ 1.85
HMGA2-208ENST00000537429 CCDC192P0DO97 292 aa26.62■■□□□ 1.85
HMGA2-208ENST00000537429 SFPQP23246 707 aaKnown RBP eCLIP26.62■■□□□ 1.85
HMGA2-208ENST00000537429 ITGB8P26012 769 aa26.62■■□□□ 1.85
HMGA2-208ENST00000537429 STX1AQ16623 288 aa26.62■■□□□ 1.85
HMGA2-208ENST00000537429 KNOP1Q1ED39 458 aaKnown RBP26.62■■□□□ 1.85
HMGA2-208ENST00000537429 TSHZ1Q6ZSZ6 1077 aa26.62■■□□□ 1.85
HMGA2-208ENST00000537429 NELFCDQ8IXH7 590 aa26.62■■□□□ 1.85
HMGA2-208ENST00000537429 ZMYM2Q9UBW7 1377 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 TTLL13PA6NNM8 815 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 ERLIN2O94905 339 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 PIGRP01833 764 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 STIM1Q13586 685 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 CATSPER4Q7RTX7 472 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 SCLYQ96I15 445 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 MRPL4Q9BYD3 311 aaKnown RBP26.61■■□□□ 1.85
HMGA2-208ENST00000537429 KCTD10Q9H3F6 313 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 ST3GAL5Q9UNP4 418 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 EXOC7Q9UPT5 735 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 USP20Q9Y2K6 914 aa26.61■■□□□ 1.85
HMGA2-208ENST00000537429 RBAK-RBAKDNI3L0D1 243 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 GPR182O15218 404 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 B4GALT5O43286 388 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 TSPAN1O60635 241 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 NBNO60934 754 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 CAPN15O75808 1086 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 PRPF4BQ13523 1007 aaKnown RBP26.6■■□□□ 1.85
HMGA2-208ENST00000537429 IKZF4Q9H2S9 585 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 PADI3Q9ULW8 664 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 CNTNAP2Q9UHC6 1331 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 ZPBP2Q6X784 338 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 SYCP3Q8IZU3 236 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 DHTKD1Q96HY7 919 aaPredicted RBP26.6■■□□□ 1.85
HMGA2-208ENST00000537429 ACO2Q99798 780 aaKnown RBP26.6■■□□□ 1.85
HMGA2-208ENST00000537429 TARS2Q9BW92 718 aaKnown RBP26.6■■□□□ 1.85
HMGA2-208ENST00000537429 ERVK-5Q9HDB9 667 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 AGPAT5Q9NUQ2 364 aa26.6■■□□□ 1.85
HMGA2-208ENST00000537429 PSMA7O14818 248 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 TGFB1I1O43294 461 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 ARF4P18085 180 aaPredicted RBP26.59■■□□□ 1.85
HMGA2-208ENST00000537429 HOXA11P31270 313 aaPredicted RBP26.59■■□□□ 1.85
HMGA2-208ENST00000537429 CD52P31358 61 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 NFX1Q12986 1120 aaKnown RBP26.59■■□□□ 1.85
HMGA2-208ENST00000537429 PAK2Q13177 524 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 CENPPQ6IPU0 288 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 GBP3Q9H0R5 595 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 SEMA6BQ9H3T3 888 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 DACH1Q9UI36 760 aa26.59■■□□□ 1.85
HMGA2-208ENST00000537429 AXLP30530 894 aa26.58■■□□□ 1.85
HMGA2-208ENST00000537429 ZNF445P59923 1031 aa26.58■■□□□ 1.85
HMGA2-208ENST00000537429 KLHL10Q6JEL2 608 aa26.58■■□□□ 1.85
HMGA2-208ENST00000537429 MFSD5Q6N075 450 aa26.58■■□□□ 1.85
HMGA2-208ENST00000537429 BICD1Q96G01 975 aa26.58■■□□□ 1.85
HMGA2-208ENST00000537429 SCN5AQ14524 2016 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 PDXKO00764 312 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 HNRNPDLO14979 420 aaKnown RBP26.57■■□□□ 1.84
HMGA2-208ENST00000537429 CXCL10P02778 98 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 SYN1P17600 705 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 LIG4P49917 911 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 NCBP1Q09161 790 aaKnown RBP26.57■■□□□ 1.84
HMGA2-208ENST00000537429 ZCWPW2Q504Y3 356 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 PLEKHG4Q58EX7 1191 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 CT47A1Q5JQC4 288 aaPredicted RBP26.57■■□□□ 1.84
HMGA2-208ENST00000537429 SLC39A4Q6P5W5 647 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 CPB2Q96IY4 423 aa26.57■■□□□ 1.84
HMGA2-208ENST00000537429 IFIH1Q9BYX4 1025 aaKnown RBP26.57■■□□□ 1.84
HMGA2-208ENST00000537429 TYW1Q9NV66 732 aaKnown RBP26.57■■□□□ 1.84
HMGA2-208ENST00000537429 A0A1B0GUA9 196 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 ANKRD63C9JTQ0 380 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 CCNE1P24864 410 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 RFC2P35250 354 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 TMEM132AQ24JP5 1023 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 ATF7IP2Q5U623 682 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 LRSAM1Q6UWE0 723 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 C11orf57Q6ZUT1 292 aaPredicted RBP26.56■■□□□ 1.84
HMGA2-208ENST00000537429 P2RX5Q93086 422 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 DNAJC25Q9H1X3 360 aa26.56■■□□□ 1.84
HMGA2-208ENST00000537429 PTPRHQ9HD43 1115 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms