RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 DDX23Q9BUQ8 820 aaKnown RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 CCDC68Q9H2F9 335 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 ITIH6Q6UXX5 1313 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 PITPNM2Q9BZ72 1349 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 ATP1A1P05023 1023 aaKnown RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 ANXA13P27216 316 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 MSH2P43246 934 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 NPEPPSP55786 919 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 ELOA2Q8IYF1 753 aaPredicted RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 OR6J1Q8NGC5 347 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 RNF25Q96BH1 459 aaPredicted RBP12.18□□□□□ -0.46
TNC-211ENST00000537320 CFAP57Q96MR6 1250 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 IL17RBQ9NRM6 502 aa12.18□□□□□ -0.46
TNC-211ENST00000537320 PNMA6AP0CW24 399 aaPredicted RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 UCHL3P15374 230 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 TAF1CQ15572 869 aaPredicted RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 MUM1L1Q5H9M0 696 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 PODXLO00592 558 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 RASGRF2O14827 1237 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 MAFGO15525 162 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 PSMC1P62191 440 aaKnown RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 ST3GAL1Q11201 340 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 GRB10Q13322 594 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 EMC2Q15006 297 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 ALS2CLQ60I27 953 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 TC2NQ8N9U0 490 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 RFFLQ8WZ73 363 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 AGPAT1Q99943 283 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 FAM205AQ6ZU69 1335 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 TPD52P55327 224 aaPredicted RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 IL9RQ01113 521 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 SNRNP35Q16560 246 aaKnown RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 ARL13BQ3SXY8 428 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 ANKRD13AQ8IZ07 590 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 PDIK1LQ8N165 341 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 DDX47Q9H0S4 455 aaKnown RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 SMARCAD1Q9H4L7 1026 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 APEX2Q9UBZ4 518 aa12.17□□□□□ -0.46
TNC-211ENST00000537320 NOVA2Q9UNW9 492 aaKnown RBP12.17□□□□□ -0.46
TNC-211ENST00000537320 ACSL3O95573 720 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 CCT5P48643 541 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 AP3M2P53677 418 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 MFSD14CQ5VZR4 134 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 CHST13Q8NET6 341 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 EPC1Q9H2F5 836 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 ASNSD1Q9NWL6 643 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 PCSK1NQ9UHG2 260 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 HPSEQ9Y251 543 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 EXOC1LA0A1B0GW35 172 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 SLC9A1P19634 815 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 POLR3CQ9BUI4 534 aaPredicted RBP12.16□□□□□ -0.46
TNC-211ENST00000537320 CPSF3Q9UKF6 684 aaKnown RBP12.16□□□□□ -0.46
TNC-211ENST00000537320 UBR1Q8IWV7 1749 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 PFASO15067 1338 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 DYNC1LI2O43237 492 aaPredicted RBP12.16□□□□□ -0.46
TNC-211ENST00000537320 SLC25A27O95847 323 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 MXD4Q14582 209 aaPredicted RBP12.16□□□□□ -0.46
TNC-211ENST00000537320 C4orf50Q6ZRC1 276 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 GMCL1Q96IK5 515 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 STK33Q9BYT3 514 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 DONSONQ9NYP3 566 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 TMX2Q9Y320 296 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 SHMT1P34896 483 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 SLC18A3Q16572 532 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 WDR72Q3MJ13 1102 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 SYT2Q8N9I0 419 aaPredicted RBP12.16□□□□□ -0.46
TNC-211ENST00000537320 RIOX1Q9H6W3 641 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 GINM1Q9NU53 330 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 STK38LQ9Y2H1 464 aa12.16□□□□□ -0.46
TNC-211ENST00000537320 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 KIAA0391O15091 583 aaKnown RBP12.15□□□□□ -0.46
TNC-211ENST00000537320 GYPCP04921 128 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 GTF2A1P52655 376 aaPredicted RBP12.15□□□□□ -0.46
TNC-211ENST00000537320 TGFB2P61812 414 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 ZKSCAN8Q15776 578 aaPredicted RBP12.15□□□□□ -0.46
TNC-211ENST00000537320 XRRA1Q6P2D8 792 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 BZW1Q7L1Q6 419 aaKnown RBP12.15□□□□□ -0.46
TNC-211ENST00000537320 GSPT2Q8IYD1 628 aaKnown RBP12.15□□□□□ -0.46
TNC-211ENST00000537320 RSRC1Q96IZ7 334 aaKnown RBP12.15□□□□□ -0.46
TNC-211ENST00000537320 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 UNC45AQ9H3U1 944 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 SMYD2Q9NRG4 433 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 MRFAP1Q9Y605 127 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 FHOD1Q9Y613 1164 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 RAD9BQ6WBX8 426 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 TRIM72Q6ZMU5 477 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 RAPH1Q70E73 1250 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 CENPUQ71F23 418 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 THEM5Q8N1Q8 247 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 CCL15-CCL14A0A0B4J2E2 113 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 A8MXQ7 604 aa12.15□□□□□ -0.46
TNC-211ENST00000537320 NOL3O60936 208 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms