RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 ARMC3Q5W041 872 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 ALKBH5Q6P6C2 394 aaKnown RBP16.79■□□□□ 0.28
CHFR-213ENST00000536843 TRIM74Q86UV6 250 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 TRIM73Q86UV7 250 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 ROPN1BQ9BZX4 212 aaPredicted RBP16.79■□□□□ 0.28
CHFR-213ENST00000536843 ROPN1Q9HAT0 212 aaPredicted RBP16.79■□□□□ 0.28
CHFR-213ENST00000536843 PCMTD2Q9NV79 361 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 DLGAP2Q9P1A6 1054 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 BIN2Q9UBW5 565 aaPredicted RBP16.79■□□□□ 0.28
CHFR-213ENST00000536843 A0A1B0GVG6 124 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 GM2AP17900 193 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 GNA11P29992 359 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 PTDSS1P48651 473 aaKnown RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 LRRC14Q15048 493 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 LRRC23Q53EV4 343 aaPredicted RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 RNF220Q5VTB9 566 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 JAMLQ86YT9 394 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 TRIM59Q8IWR1 403 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 SLC17A8Q8NDX2 589 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 CALML4Q96GE6 196 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 NUDCD1Q96RS6 583 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 NAP1L3Q99457 506 aaPredicted RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 GRHL1Q9NZI5 618 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 RPL26L1Q9UNX3 145 aaKnown RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 MROH7Q68CQ1 1323 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 TNS1Q9HBL0 1735 aaKnown RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 KLRG2A4D1S0 409 aaPredicted RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 RIPK2O43353 540 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 COQ9O75208 318 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 SMARCA1P28370 1054 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 RANBP1P43487 201 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 WASHC2DQ5SRD0 308 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 SESTD1Q86VW0 696 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 SP8Q8IXZ3 490 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 RBBP8NLQ8NC74 664 aaPredicted RBP16.78■□□□□ 0.28
CHFR-213ENST00000536843 FAM13CQ8NE31 585 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 INPP5DQ92835 1189 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 CEP63Q96MT8 703 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 CCDC113Q9H0I3 377 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 BLOC1S4Q9NUP1 217 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 RASAL2Q9UJF2 1139 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 INTUQ9ULD6 942 aa16.78■□□□□ 0.28
CHFR-213ENST00000536843 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.28
CHFR-213ENST00000536843 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 TMEM120BA0PK00 339 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 GNA14O95837 355 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 AFPP02771 609 aaKnown RBP16.77■□□□□ 0.28
CHFR-213ENST00000536843 AKR1B1P15121 316 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 SLCO1A2P46721 670 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 CGB2Q6NT52 195 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 VSTM1Q6UX27 236 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 NEK8Q86SG6 692 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 ECHDC2Q86YB7 292 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 LRRC47Q8N1G4 583 aaKnown RBP16.77■□□□□ 0.28
CHFR-213ENST00000536843 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 MXD3Q9BW11 206 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHFR-213ENST00000536843 MTMR4Q9NYA4 1195 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 CTTNBP2NLQ9P2B4 639 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 AMFRQ9UKV5 643 aa16.77■□□□□ 0.28
CHFR-213ENST00000536843 EYA4O95677 639 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 PYGBP11216 843 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.27
CHFR-213ENST00000536843 MAPK7Q13164 816 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 UBAP2Q5T6F2 1119 aaKnown RBP16.77■□□□□ 0.27
CHFR-213ENST00000536843 DPP8Q6V1X1 898 aaPredicted RBP16.77■□□□□ 0.27
CHFR-213ENST00000536843 CLEC10AQ8IUN9 316 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 CERS5Q8N5B7 392 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 GRAMD1AQ96CP6 724 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 FGD4Q96M96 766 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 RIOX1Q9H6W3 641 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 DDX4Q9NQI0 724 aaKnown RBP16.77■□□□□ 0.27
CHFR-213ENST00000536843 MTRF1LQ9UGC7 380 aaKnown RBP16.77■□□□□ 0.27
CHFR-213ENST00000536843 PARP2Q9UGN5 583 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 DBR1Q9UK59 544 aaKnown RBP16.77■□□□□ 0.27
CHFR-213ENST00000536843 SNX24Q9Y343 169 aa16.77■□□□□ 0.27
CHFR-213ENST00000536843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.77■□□□□ 0.27
CHFR-213ENST00000536843 IMPDH2P12268 514 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 PRKCIP41743 596 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 TECP42680 631 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 POLE2P56282 527 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 GABPAQ06546 454 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 GRB10Q13322 594 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 MAIP1Q8WWC4 291 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 GLG1Q92896 1179 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 ZNF333Q96JL9 665 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 SCOCQ9UIL1 159 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 LRCH1Q9Y2L9 728 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 DDX3YO15523 660 aaKnown RBP16.76■□□□□ 0.27
CHFR-213ENST00000536843 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 RARGP13631 454 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 MTFR1Q15390 333 aa16.76■□□□□ 0.27
CHFR-213ENST00000536843 CLUL1Q15846 466 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms