RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 CNBD1Q8NA66 436 aa13.03□□□□□ -0.32
PTCD2-211ENST00000536805 TCP11Q8WWU5 503 aa13.03□□□□□ -0.32
PTCD2-211ENST00000536805 TUFT1Q9NNX1 390 aa13.03□□□□□ -0.32
PTCD2-211ENST00000536805 DDX4Q9NQI0 724 aaKnown RBP13.03□□□□□ -0.32
PTCD2-211ENST00000536805 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
PTCD2-211ENST00000536805 ABCF3Q9NUQ8 709 aa13.03□□□□□ -0.32
PTCD2-211ENST00000536805 CTTNBP2NLQ9P2B4 639 aa13.03□□□□□ -0.32
PTCD2-211ENST00000536805 MTUS1Q9ULD2 1270 aa13.03□□□□□ -0.32
PTCD2-211ENST00000536805 FAM86B1E9PN63 330 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 MSH4O15457 936 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 SUN1O94901 812 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 HLA-DOAP06340 250 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 FAM86B2P0C5J1 330 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 RARAP10276 462 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 BCRP11274 1271 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 SCP2P22307 547 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 FGFR4P22455 802 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 COILP38432 576 aaPredicted RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 GPC5P78333 572 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 CYP4A11Q02928 519 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 MYBPC2Q14324 1141 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 FAM133BQ5BKY9 247 aaKnown RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 TBC1D1Q86TI0 1168 aaPredicted RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 PALB2Q86YC2 1186 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 TBC1D16Q8TBP0 767 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 KRT35Q92764 455 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 SLCO2A1Q92959 643 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 MKL1Q969V6 931 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 SERPINB12Q96P63 405 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 P2RX7Q99572 595 aaKnown RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 AMNQ9BXJ7 453 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 MOV10L1Q9BXT6 1211 aaKnown RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 MTFR1LQ9H019 292 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 PARVGQ9HBI0 331 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.32
PTCD2-211ENST00000536805 AGAP1Q9UPQ3 857 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 C15orf41Q9Y2V0 281 aa13.02□□□□□ -0.32
PTCD2-211ENST00000536805 LTBP1Q14766 1721 aa13.02□□□□□ -0.33
PTCD2-211ENST00000536805 UBOX5O94941 541 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 CYP3A4P08684 503 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 CLTAP09496 248 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 PNMA8AQ86V59 439 aaPredicted RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 EXOC3L1Q86VI1 746 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 MYCT1Q8N699 235 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 CD101Q93033 1021 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 TBC1D31Q96DN5 1066 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 STAMBPL1Q96FJ0 436 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 AGPAT3Q9NRZ7 376 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 NOP53Q9NZM5 478 aaKnown RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 GJB6O95452 261 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 MUTP22033 750 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 IFNAR2P48551 515 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 BFSP1Q12934 665 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 BNIP1Q12981 228 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 ACCSLQ4AC99 568 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 UBAP2Q5T6F2 1119 aaKnown RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 AADACL2Q6P093 401 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 SLC13A5Q86YT5 568 aaPredicted RBP13.01□□□□□ -0.33
PTCD2-211ENST00000536805 ZDHHC14Q8IZN3 488 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 LMO3Q8TAP4 145 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 KCND2Q9NZV8 630 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 WHRNQ9P202 907 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
PTCD2-211ENST00000536805 BTAF1O14981 1849 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 RBBP6Q7Z6E9 1792 aaKnown RBP13□□□□□ -0.33
PTCD2-211ENST00000536805 FOXN3O00409 490 aaPredicted RBP13□□□□□ -0.33
PTCD2-211ENST00000536805 P4HA2O15460 535 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 RTN2O75298 545 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 FTLP02792 175 aaPredicted RBP13□□□□□ -0.33
PTCD2-211ENST00000536805 TRIM49P0CI25 452 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 TRIM49CP0CI26 452 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 IBSPP21815 317 aaPredicted RBP13□□□□□ -0.33
PTCD2-211ENST00000536805 COMTP21964 271 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 CCND1P24385 295 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 SLCO1A2P46721 670 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 COPS2P61201 443 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 MYO1EQ12965 1108 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 CALCOCO2Q13137 446 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 SIX1Q15475 284 aaPredicted RBP13□□□□□ -0.33
PTCD2-211ENST00000536805 ARHGAP44Q17R89 818 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 SLFN13Q68D06 897 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 CHADLQ6NUI6 762 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 ZNF720Q7Z2F6 126 aa13□□□□□ -0.33
PTCD2-211ENST00000536805 CCDC105Q8IYK2 499 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms