RNA–Protein interactions for RNA: ENST00000536702.1

CUL3-213, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-213ENST00000536702 IRAK3Q9Y616 596 aa17.12■□□□□ 0.33
CUL3-213ENST00000536702 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
CUL3-213ENST00000536702 VPS13AQ96RL7 3174 aa17.12■□□□□ 0.33
CUL3-213ENST00000536702 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
CUL3-213ENST00000536702 DTNBO60941 627 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 ZNF623O75123 536 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 QARSP47897 775 aaKnown RBP17.11■□□□□ 0.33
CUL3-213ENST00000536702 AFF1P51825 1210 aaKnown RBP17.11■□□□□ 0.33
CUL3-213ENST00000536702 PPP2R5CQ13362 524 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 CPLX2Q6PUV4 134 aaKnown RBP17.11■□□□□ 0.33
CUL3-213ENST00000536702 AGMOQ6ZNB7 445 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 CABP7Q86V35 215 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 URGCPQ8TCY9 931 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 SLC7A3Q8WY07 619 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 ATOH1Q92858 354 aaPredicted RBP17.11■□□□□ 0.33
CUL3-213ENST00000536702 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
CUL3-213ENST00000536702 CEP170P1Q96L14 293 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 SLKQ9H2G2 1235 aaPredicted RBP17.11■□□□□ 0.33
CUL3-213ENST00000536702 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 KCNMB3Q9NPA1 279 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 DENND4AQ7Z401 1863 aa17.11■□□□□ 0.33
CUL3-213ENST00000536702 ZFHX2Q9C0A1 2572 aaPredicted RBP17.1■□□□□ 0.33
CUL3-213ENST00000536702 CCDC194A0A1B0GVG4 234 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 CARNS1A5YM72 827 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 H0Y858 1186 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 DDHD2O94830 711 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 SRGAP2CP0DJJ0 459 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 GIT2Q14161 759 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 ATAT1Q5SQI0 421 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 PSPC1Q8WXF1 523 aaKnown RBP17.1■□□□□ 0.33
CUL3-213ENST00000536702 PGBD4Q96DM1 585 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 LXNQ9BS40 222 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 DHX33Q9H6R0 707 aaKnown RBP17.1■□□□□ 0.33
CUL3-213ENST00000536702 SFXN1Q9H9B4 322 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 LIMD1Q9UGP4 676 aa17.1■□□□□ 0.33
CUL3-213ENST00000536702 DMDP11532 3685 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 GFRA3O60609 400 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 POMCP01189 267 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 P4HBP07237 508 aaKnown RBP17.09■□□□□ 0.33
CUL3-213ENST00000536702 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 NCAPH2Q6IBW4 605 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 NEK8Q86SG6 692 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 ZDHHC14Q8IZN3 488 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 FAM177A1Q8N128 213 aaPredicted RBP17.09■□□□□ 0.33
CUL3-213ENST00000536702 TMEM105Q8N8V8 129 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
CUL3-213ENST00000536702 MS4A3Q96HJ5 214 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 PHF20Q9BVI0 1012 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
CUL3-213ENST00000536702 ST18O60284 1047 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 CCNT1O60563 726 aaKnown RBP17.08■□□□□ 0.32
CUL3-213ENST00000536702 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
CUL3-213ENST00000536702 CNPP09543 421 aaKnown RBP17.08■□□□□ 0.32
CUL3-213ENST00000536702 KLRC2P26717 231 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 HOXA11P31270 313 aaPredicted RBP17.08■□□□□ 0.32
CUL3-213ENST00000536702 RFC5P40937 340 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 EMC2Q15006 297 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 PIK3AP1Q6ZUJ8 805 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 SRGAP1Q7Z6B7 1085 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 MRPL10Q7Z7H8 261 aaKnown RBP17.08■□□□□ 0.32
CUL3-213ENST00000536702 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 OXER1Q8TDS5 423 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 HAS1Q92839 578 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 FAM193BQ96PV7 902 aaPredicted RBP17.08■□□□□ 0.32
CUL3-213ENST00000536702 EMILIN2Q9BXX0 1053 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 PDRG1Q9NUG6 133 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 RGL1Q9NZL6 768 aa17.08■□□□□ 0.32
CUL3-213ENST00000536702 PRG3Q9Y2Y8 225 aaPredicted RBP17.08■□□□□ 0.32
CUL3-213ENST00000536702 PLXNA3P51805 1871 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 ARID2Q68CP9 1835 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 CNTNAP2Q9UHC6 1331 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 C2CD2LO14523 706 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 NRP1O14786 923 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
CUL3-213ENST00000536702 YWHABP31946 246 aaKnown RBP17.07■□□□□ 0.32
CUL3-213ENST00000536702 CLCN4P51793 760 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 CYP4A11Q02928 519 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 SCRN1Q12765 414 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 CCDC149Q6ZUS6 474 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 GPR149Q86SP6 731 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 RNF149Q8NC42 400 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 DYDC2Q96IM9 177 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 TMEM175Q9BSA9 504 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 TM6SF1Q9BZW5 370 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 FAN1Q9Y2M0 1017 aa17.07■□□□□ 0.32
CUL3-213ENST00000536702 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
CUL3-213ENST00000536702 FAM205CA6NFA0 338 aa17.06■□□□□ 0.32
CUL3-213ENST00000536702 ZBTB39O15060 712 aa17.06■□□□□ 0.32
CUL3-213ENST00000536702 MAP3K13O43283 966 aa17.06■□□□□ 0.32
CUL3-213ENST00000536702 MARCH6O60337 910 aa17.06■□□□□ 0.32
CUL3-213ENST00000536702 NCLP19338 710 aaKnown RBP17.06■□□□□ 0.32
CUL3-213ENST00000536702 CTTNQ14247 550 aaKnown RBP17.06■□□□□ 0.32
CUL3-213ENST00000536702 EPHA7Q15375 998 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms