RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CLASP2O75122 1294 aaKnown RBP13.87□□□□□ -0.19
PRKDC-207ENST00000536483 SPATA31C1P0DKV0 1188 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 MCM7P33993 719 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 CA8P35219 290 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 TXKP42681 527 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 ALDH7A1P49419 539 aaKnown RBP13.87□□□□□ -0.19
PRKDC-207ENST00000536483 TOB1P50616 345 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-207ENST00000536483 BCAR1P56945 870 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 CUL4AQ13619 759 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 PDIA5Q14554 519 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 TTC38Q5R3I4 469 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 CEP170P1Q96L14 293 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 POLR3CQ9BUI4 534 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-207ENST00000536483 MRPL9Q9BYD2 267 aaKnown RBP13.87□□□□□ -0.19
PRKDC-207ENST00000536483 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
PRKDC-207ENST00000536483 IFT122Q9HBG6 1241 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 DACT1Q9NYF0 836 aa13.87□□□□□ -0.19
PRKDC-207ENST00000536483 A0A087WZ62 844 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 LAD1O00515 517 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 ZBTB39O15060 712 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 CXCL14O95715 111 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 AVPR2P30518 371 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 PHKA2P46019 1235 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.191e-10■■■■□ 22.1
PRKDC-207ENST00000536483 FOSBP53539 338 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 CTTNQ14247 550 aaKnown RBP13.86□□□□□ -0.19
PRKDC-207ENST00000536483 PCBP1Q15365 356 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRKDC-207ENST00000536483 LONRF3Q496Y0 759 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 PLA2G4FQ68DD2 849 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 CES5AQ6NT32 575 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 TPH2Q8IWU9 490 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 TCP11Q8WWU5 503 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 RSPH1Q8WYR4 309 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 TMEM169Q96HH4 297 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 FDXACB1Q9BRP7 624 aaPredicted RBP13.86□□□□□ -0.19
PRKDC-207ENST00000536483 ADAM7Q9H2U9 754 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 DBR1Q9UK59 544 aaKnown RBP13.86□□□□□ -0.19
PRKDC-207ENST00000536483 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
PRKDC-207ENST00000536483 NR2E1Q9Y466 385 aa13.86□□□□□ -0.19
PRKDC-207ENST00000536483 CACNA1HO95180 2353 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 C2CD4DB7Z1M9 353 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 ZC3H11AO75152 810 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 DGAT1O75907 488 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 PDGFBP01127 241 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 WEE2P0C1S8 567 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 RPA1P27694 616 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 PRPHP41219 470 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 RARRES1P49788 294 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 POLGP54098 1239 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 ITIH3Q06033 890 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 ZNF174Q15697 407 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 TWF2Q6IBS0 349 aaKnown RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 SRGAP1Q7Z6B7 1085 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 TMEM173Q86WV6 379 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 CATSPER3Q86XQ3 398 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 VPS52Q8N1B4 723 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 C12orf76Q8N812 135 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 IGSF22Q8N9C0 903 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 KREMEN2Q8NCW0 462 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 PSPC1Q8WXF1 523 aaKnown RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 AUTS2Q8WXX7 1259 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 LPPQ93052 612 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 RIPOR3Q96MK2 946 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 FAM86C1Q9NVL1 165 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.85□□□□□ -0.19
PRKDC-207ENST00000536483 COL4A3BPQ9Y5P4 624 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 STK24Q9Y6E0 443 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 MYO15AQ9UKN7 3530 aa13.85□□□□□ -0.19
PRKDC-207ENST00000536483 MEIS3P2A8K0S8 358 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 ZNF623O75123 536 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRKDC-207ENST00000536483 GJB2P29033 226 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 ARL2P36404 184 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 MXD4Q14582 209 aaPredicted RBP13.84□□□□□ -0.19
PRKDC-207ENST00000536483 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
PRKDC-207ENST00000536483 EMC2Q15006 297 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 RILPL1Q5EBL4 403 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 XKR9Q5GH70 373 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
PRKDC-207ENST00000536483 KANK3Q6NY19 840 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 FERMT3Q86UX7 667 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 RHPN2Q8IUC4 686 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 KSR1Q8IVT5 923 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
PRKDC-207ENST00000536483 NECTIN4Q96NY8 510 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 NACC1Q96RE7 527 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 NFKBIZQ9BYH8 718 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 ZBP1Q9H171 429 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 NRDE2Q9H7Z3 1164 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.84□□□□□ -0.19
PRKDC-207ENST00000536483 PIN4Q9Y237 131 aaKnown RBP13.84□□□□□ -0.19
PRKDC-207ENST00000536483 INPP5FQ9Y2H2 1132 aa13.84□□□□□ -0.19
PRKDC-207ENST00000536483 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms