RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TISP43B9A030 160 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 M0QZ92 97 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 EDN1P05305 212 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 RPLP2P05387 115 aaKnown RBP12.64□□□□□ -0.39
CDCA3-206ENST00000536241 PRKCBP05771 671 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 CKBP12277 381 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 DARSP14868 501 aaKnown RBP12.64□□□□□ -0.39
CDCA3-206ENST00000536241 SCP2P22307 547 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
CDCA3-206ENST00000536241 ABCD1P33897 745 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 TLE2Q04725 743 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 SNX17Q15036 470 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 ZCWPW2Q504Y3 356 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 C1orf53Q5VUE5 145 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 MAP4K3Q8IVH8 894 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 BICD1Q96G01 975 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 EEF2KMTQ96G04 330 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 ZBTB45Q96K62 511 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-206ENST00000536241 TSG101Q99816 390 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 SRRTQ9BXP5 876 aaKnown RBP12.64□□□□□ -0.39
CDCA3-206ENST00000536241 TYW1Q9NV66 732 aaKnown RBP12.64□□□□□ -0.39
CDCA3-206ENST00000536241 FANCLQ9NW38 375 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 TRAF3IP3Q9Y228 551 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 TRPV2Q9Y5S1 764 aa12.64□□□□□ -0.39
CDCA3-206ENST00000536241 UBE4BO95155 1302 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 MROH7Q68CQ1 1323 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 ACKR2O00590 384 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 IKBKBO14920 756 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 TLR3O15455 904 aaKnown RBP12.63□□□□□ -0.39
CDCA3-206ENST00000536241 B4GALT5O43286 388 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 CALUO43852 315 aaPredicted RBP12.63□□□□□ -0.39
CDCA3-206ENST00000536241 MYL5Q02045 173 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 LRRC63Q05C16 580 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 MGAT3Q09327 533 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 ADAM9Q13443 819 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 TPD52L1Q16890 204 aaPredicted RBP12.63□□□□□ -0.39
CDCA3-206ENST00000536241 FAM187BQ17R55 369 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 FAM26DQ5JW98 314 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 TOX2Q96NM4 488 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
CDCA3-206ENST00000536241 OSBPL7Q9BZF2 842 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
CDCA3-206ENST00000536241 PRMT7Q9NVM4 692 aaPredicted RBP12.63□□□□□ -0.39
CDCA3-206ENST00000536241 ATP11BQ9Y2G3 1177 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 NOC2LQ9Y3T9 749 aaKnown RBP12.63□□□□□ -0.39
CDCA3-206ENST00000536241 NFE2L3Q9Y4A8 694 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 PHLPP2Q6ZVD8 1323 aa12.63□□□□□ -0.39
CDCA3-206ENST00000536241 BRCA2P51587 3418 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 ADSSP30520 456 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 LIG4P49917 911 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 FKBP3Q00688 224 aaKnown RBP12.62□□□□□ -0.39
CDCA3-206ENST00000536241 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
CDCA3-206ENST00000536241 GSE1Q14687 1217 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 AMHR2Q16671 573 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 HSP90AA4PQ58FG1 418 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 SLC39A4Q6P5W5 647 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 HS2ST1Q7LGA3 356 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 CDR2LQ86X02 465 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-206ENST00000536241 CSGALNACT2Q8N6G5 542 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 CPB2Q96IY4 423 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 MRPL4Q9BYD3 311 aaKnown RBP12.62□□□□□ -0.39
CDCA3-206ENST00000536241 PCIF1Q9H4Z3 704 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 AGPAT3Q9NRZ7 376 aa12.62□□□□□ -0.39
CDCA3-206ENST00000536241 GOLGA6L19H0YKK7 550 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 HNRNPDLO14979 420 aaKnown RBP12.61□□□□□ -0.39
CDCA3-206ENST00000536241 ERLIN2O94905 339 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 PIGRP01833 764 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 NR3C1P04150 777 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
CDCA3-206ENST00000536241 BFSP2Q13515 415 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 TMEM132AQ24JP5 1023 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 EDRF1Q3B7T1 1238 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 CATSPER4Q7RTX7 472 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 UBE2Q1Q7Z7E8 422 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 CREBRFQ8IUR6 639 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 CBWD1Q9BRT8 395 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 TCHPQ9BT92 498 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 HSD3B7Q9H2F3 369 aa12.61□□□□□ -0.39
CDCA3-206ENST00000536241 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
CDCA3-206ENST00000536241 CETN3O15182 167 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 TSPAN1O60635 241 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 CAND2O75155 1236 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 RPS6KA5O75582 802 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 NR2F2P24468 414 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 RPL13P26373 211 aaKnown RBP12.6□□□□□ -0.39
CDCA3-206ENST00000536241 HOXA11P31270 313 aaPredicted RBP12.6□□□□□ -0.39
CDCA3-206ENST00000536241 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDCA3-206ENST00000536241 CYP2J2P51589 502 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 SNRPFP62306 86 aaKnown RBP12.6□□□□□ -0.39
CDCA3-206ENST00000536241 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms