RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 EIF3HO15372 352 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 NCK2O43639 380 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 ZEB2O60315 1214 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 HSF2BPO75031 334 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 PALMO75781 387 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 GLI1P08151 1106 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 PLA2G4BP0C869 781 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 FAM228BP0C875 321 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 ZBTB48P10074 688 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 MZF1P28698 734 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 RFC4P35249 363 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 NOP2P46087 812 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 MAP2K3P46734 347 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TNNI2P48788 182 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 SLC12A3P55017 1021 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 POLR2FP61218 127 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 SLC7A5Q01650 507 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 ATP2B2Q01814 1243 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 ASIC2Q16515 512 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 CDC37Q16543 378 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 UBE2SQ16763 222 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 BMT2Q1RMZ1 405 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TTMPQ5BVD1 217 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 WDR44Q5JSH3 913 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 MFSD14BQ5SR56 506 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TRAPPC3LQ5T215 181 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TTBK2Q6IQ55 1244 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 C8orf74Q6P047 294 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 DPP8Q6V1X1 898 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 RIPOR1Q6ZS17 1223 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 EPM2AIP1Q7L775 607 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TMC4Q7Z404 712 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 IRF2BP2Q7Z5L9 587 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 FRMD5Q7Z6J6 570 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TREML1Q86YW5 311 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 EFCAB13Q8IY85 973 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 C10orf67Q8IYJ2 551 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 LRRC47Q8N1G4 583 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 GPATCH11Q8N954 259 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TBC1D16Q8TBP0 767 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 SCFD2Q8WU76 684 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 SCFD1Q8WVM8 642 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 CUL5Q93034 780 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 MKL1Q969V6 931 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 ARL8AQ96BM9 186 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 RBM17Q96I25 401 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 PBKQ96KB5 322 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 CCDC17Q96LX7 622 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 GDAP1L1Q96MZ0 367 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 FAM129BQ96TA1 746 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 PAGR1Q9BTK6 254 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 MXD3Q9BW11 206 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 CAPS2Q9BXY5 557 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 FGFBP2Q9BYJ0 223 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 EHD4Q9H223 541 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 DHX36Q9H2U1 1008 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 NLRC4Q9NPP4 1024 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 GEMIN8Q9NWZ8 242 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 SMARCAL1Q9NZC9 954 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 RSPH14Q9UHP6 348 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 FBXL5Q9UKA1 691 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 INTUQ9ULD6 942 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 PCDHA12Q9UN75 941 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 POLIQ9UNA4 740 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 BZW2Q9Y6E2 419 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 LTBP4Q8N2S1 1624 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 MYH1P12882 1939 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 A0A0A6YYK5 440 aaPredicted RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 GTPBP10A4D1E9 387 aaKnown RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 E9PMD0 336 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 TGFBR3LH3BV60 316 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 CETN3O15182 167 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 BUB1O43683 1085 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 GFPT2O94808 682 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 HEXIM1O94992 359 aaKnown RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 KIF4AO95239 1232 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 P4HBP07237 508 aaKnown RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 FAM153BP0C7A2 387 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 PCSK2P16519 638 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 CXCR5P32302 372 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 CIITAP33076 1130 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 SHMT1P34896 483 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 HSPA9P38646 679 aaKnown RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 CARSP49589 748 aaKnown RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 GNGT1P63211 74 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 SPIRE1Q08AE8 756 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 KLHL30Q0D2K2 578 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 AP3B2Q13367 1082 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 GIT2Q14161 759 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 NFIL3Q16649 462 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 FAM153CQ494X1 144 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 TDRD12Q587J7 1177 aaKnown RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 ARSHQ5FYA8 562 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 LRIG3Q6UXM1 1119 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 KDM7AQ6ZMT4 941 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 SLFN11Q7Z7L1 901 aa6.25□□□□□ -1.41
VPS33A-203ENST00000536212 NOP9Q86U38 636 aaKnown RBP6.25□□□□□ -1.41
VPS33A-203ENST00000536212 GPBP1Q86WP2 473 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms