RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DDX12PQ92771 950 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 STAMQ92783 540 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DNAJC19Q96DA6 116 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FIZ1Q96SL8 496 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NTPCRQ9BSD7 190 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 EIF2AQ9BY44 585 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 C2orf40Q9H1Z8 148 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ELAC1Q9H777 363 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 C17orf75Q9HAS0 396 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SLC28A3Q9HAS3 691 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM105AQ9NUU6 356 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TMEM161AQ9NX61 479 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 HPSEQ9Y251 543 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PCDHB7Q9Y5E2 793 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PHLPP2Q6ZVD8 1323 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 EPOPA6NHQ4 379 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 POLR2DO15514 142 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 STAG3L1P0CL83 205 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PFKFB1P16118 471 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CMA1P23946 247 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 AXLP30530 894 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NCKAP1LP55160 1127 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LONRF3Q496Y0 759 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CLLU1OSQ5K130 101 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NT5DC1Q5TFE4 455 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NOTUMQ6P988 496 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LPPQ93052 612 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 GUCD1Q96NT3 240 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 GOLPH3LQ9H4A5 285 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CERS4Q9HA82 394 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 KMT5AQ9NQR1 393 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 KBTBD4Q9NVX7 518 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MTMR10Q9NXD2 777 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 HCSTQ9UBK5 93 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LRFN2Q9ULH4 789 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CHD9Q3L8U1 2897 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CDH23Q9H251 3354 aa12.48□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TRIP11Q15643 1979 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 A0A1B0GUA9 196 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 K7ERI5 159 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ACKR2O00590 384 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZNF623O75123 536 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM13AO94988 1023 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 EOMESO95936 686 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LIG1P18858 919 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 EFNA5P52803 228 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PRPF4BQ13523 1007 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MAPK6Q16659 721 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PAN2Q504Q3 1202 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 EEF1DP3Q658K8 133 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SFR1Q86XK3 245 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 IQUBQ8NA54 791 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RNF169Q8NCN4 708 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SMG8Q8ND04 991 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PRIMPOLQ96LW4 560 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CASD1Q96PB1 797 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 C17orf80Q9BSJ5 609 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PDZD7Q9H5P4 517 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PARVGQ9HBI0 331 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CHMP5Q9NZZ3 219 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PCDHB2Q9Y5E7 798 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CHD7Q9P2D1 2997 aa12.47□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MYO9BQ13459 2157 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 A0A1W2PQ27 194 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 A0A1W2PQ64 194 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 A0A1W2PQD8 194 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FRMD3A2A2Y4 597 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TBKBP1A7MCY6 615 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TBCAO75347 108 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MAPTP10636 758 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CASP1P29466 404 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RAB27AP51159 221 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NDUFA8P51970 172 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 BTG3Q14201 252 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SLC27A1Q6PCB7 646 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 AGMOQ6ZNB7 445 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LRRC55Q6ZSA7 311 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MRPL10Q7Z7H8 261 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 GRAMD1CQ8IYS0 662 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CMTR2Q8IYT2 770 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MYCT1Q8N699 235 aa12.46□□□□□ -0.41
TNFRSF1A-208ENST00000536194 HELQQ8TDG4 1101 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms