RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 SPATA31A5Q5VU36 1347 aa7.46□□□□□ -1.22
CPSF7-215ENST00000536145 SPATA31A6Q5VVP1 1343 aa7.46□□□□□ -1.22
CPSF7-215ENST00000536145 SPATA31A7Q8IWB4 1347 aa7.46□□□□□ -1.22
CPSF7-215ENST00000536145 KDM3AQ9Y4C1 1321 aa7.46□□□□□ -1.22
CPSF7-215ENST00000536145 NAV1Q8NEY1 1877 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 LRRD1A4D1F6 860 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ANKRD62A6NC57 917 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 SMIM23A6NLE4 172 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 HIP1RO75146 1068 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 AKAP3O75969 853 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 GOLGA8HP0CJ92 632 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 CETPP11597 493 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 NR2F2P24468 414 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 IVDP26440 423 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 KLRK1P26718 216 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ALDH3A1P30838 453 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 CASP5P51878 434 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 POLGP54098 1239 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 RAD23BP54727 409 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 SNX1Q13596 522 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 MOGSQ13724 837 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 GIT2Q14161 759 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 LRRC14Q15048 493 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 PDCD2Q16342 344 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 CCDC142Q17RM4 750 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 KNOP1Q1ED39 458 aaKnown RBP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 TBC1D25Q3MII6 688 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 PPP1R15BQ5SWA1 713 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 SOGA3Q5TF21 947 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 FOXB2Q5VYV0 432 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 C3orf67Q6ZVT6 689 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 VPS36Q86VN1 386 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 GPBP1Q86WP2 473 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 LMNTD2Q8IXW0 634 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 CYP4X1Q8N118 509 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 UHMK1Q8TAS1 419 aaKnown RBP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 DENND1AQ8TEH3 1009 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 NCSTNQ92542 709 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 KRT35Q92764 455 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 C18orf8Q96DM3 657 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 BICD1Q96G01 975 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 FAM210AQ96ND0 272 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 NLRP3Q96P20 1036 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 TRAPPC9Q96Q05 1148 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 TSC22D3Q99576 134 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ZSWIM1Q9BR11 485 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 STK33Q9BYT3 514 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 NT5C3AQ9H0P0 336 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 CYLDQ9NQC7 956 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 PAPOLBQ9NRJ5 636 aaKnown RBP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 TBC1D7Q9P0N9 293 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 WHRNQ9P202 907 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 MINPP1Q9UNW1 487 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 CHKBQ9Y259 395 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ATF5Q9Y2D1 282 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-215ENST00000536145 STK38LQ9Y2H1 464 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 STARD13Q9Y3M8 1113 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ALG6Q9Y672 507 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 STRCP1A6NGW2 1772 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ASTN1O14525 1302 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ADGRA3Q8IWK6 1321 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 SYNGAP1Q96PV0 1343 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 WNK3Q9BYP7 1800 aa7.45□□□□□ -1.22
CPSF7-215ENST00000536145 ARFGEF1Q9Y6D6 1849 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 TCRBV7S2A1N4TA0A589 114 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 FSCN2O14926 492 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 CALUO43852 315 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-215ENST00000536145 RNF8O76064 485 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 SNHG28P0DPA3 235 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 MUTP22033 750 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 PRDX5P30044 214 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 ATP5DP30049 168 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 CHKAP35790 457 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 SLCO1A2P46721 670 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 MARCKSL1P49006 195 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 CASP4P49662 377 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 ADCY7P51828 1080 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 SLC18A1P54219 525 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 OCRLQ01968 901 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 CTTNQ14247 550 aaKnown RBP7.44□□□□□ -1.22
CPSF7-215ENST00000536145 LONRF1Q17RB8 773 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 CAVIN4Q5BKX8 364 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 HERC4Q5GLZ8 1057 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-215ENST00000536145 TMEM63BQ5T3F8 832 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 C16orf86Q6ZW13 317 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 SLC13A5Q86YT5 568 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-215ENST00000536145 RELL1Q8IUW5 271 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 RHOT2Q8IXI1 618 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 SLC44A5Q8NCS7 719 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 PHC3Q8NDX5 983 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 SUPT20HQ8NEM7 779 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 ATL2Q8NHH9 583 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 MORC4Q8TE76 937 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 SH3RF3Q8TEJ3 882 aaPredicted RBP7.44□□□□□ -1.22
CPSF7-215ENST00000536145 C10orf82Q8WW14 230 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 MAML1Q92585 1016 aa7.44□□□□□ -1.22
CPSF7-215ENST00000536145 DDX23Q9BUQ8 820 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms