RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CDH7Q9ULB5 785 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 LHX6Q9UPM6 363 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
CLIP1-206ENST00000535290 CARNS1A5YM72 827 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 NCAM2O15394 837 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 GAS2O43903 313 aaKnown RBP9.41□□□□□ -0.9
CLIP1-206ENST00000535290 SOD2P04179 222 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 URODP06132 367 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 LIMK1P53667 647 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 NRLP54845 237 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 NTHL1P78549 312 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 SRSF5Q13243 272 aaKnown RBP9.41□□□□□ -0.9
CLIP1-206ENST00000535290 FAM160B1Q5W0V3 765 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 SWSAP1Q6NVH7 229 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 EFCAB12Q6NXP0 572 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 ELMSAN1Q6PJG2 1045 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 PALB2Q86YC2 1186 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 LRRC71Q8N4P6 559 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 KXD1Q9BQD3 176 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 TMEM121BQ9BXQ6 578 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-206ENST00000535290 RXFP1Q9HBX9 757 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 DPP7Q9UHL4 492 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 PCDHA6Q9UN73 950 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 PCDHA8Q9Y5H6 950 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 ZFP37Q9Y6Q3 630 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-206ENST00000535290 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
CLIP1-206ENST00000535290 MAST4O15021 2626 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 MIA3Q5JRA6 1907 aa9.41□□□□□ -0.9
CLIP1-206ENST00000535290 PATJQ8NI35 1801 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 EVPLQ92817 2033 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 TGM5O43548 720 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 KCNK5O95279 499 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 ALDH2P05091 517 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 PYGBP11216 843 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 SPINK2P20155 84 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 GPC3P51654 580 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 PDE1AP54750 535 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 PFKPQ01813 784 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 ADCY1Q08828 1119 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 SF3A2Q15428 464 aaKnown RBP9.4□□□□□ -0.9
CLIP1-206ENST00000535290 AASDHQ4L235 1098 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-206ENST00000535290 ZNF852Q6ZMS4 543 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 GRASPQ7Z6J2 395 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-206ENST00000535290 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 HDAC7Q8WUI4 952 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 RSPH1Q8WYR4 309 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 FGF13Q92913 245 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 RRP36Q96EU6 259 aaKnown RBP9.4□□□□□ -0.9
CLIP1-206ENST00000535290 MAP7D2Q96T17 732 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 HERC2P3Q9BVR0 1158 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 TRAIPQ9BWF2 469 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 CHRDQ9H2X0 955 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 PLEKHA4Q9H4M7 779 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 CNNM2Q9H8M5 875 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 HEBP1Q9NRV9 189 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 MARCH5Q9NX47 278 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 ZDHHC7Q9NXF8 308 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 STK39Q9UEW8 545 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 FAN1Q9Y2M0 1017 aa9.4□□□□□ -0.9
CLIP1-206ENST00000535290 PRG3Q9Y2Y8 225 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-206ENST00000535290 CHURC1-FNTBB4DL54 471 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 CCER2I3L3R5 266 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 NRP1O14786 923 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 MAGEB2O15479 319 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 FOXD2O60548 495 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 EFEMP2O95967 443 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 TOP3BO95985 862 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 KIF5BP33176 963 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 FNTBP49356 437 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 GLUD2P49448 558 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 MFAP1P55081 439 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 CCDC6Q16204 474 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 CEP55Q53EZ4 464 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 TWF2Q6IBS0 349 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 MIS18BP1Q6P0N0 1132 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 LILRA6Q6PI73 481 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 MAMSTRQ6ZN01 415 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 TICAM2Q86XR7 235 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 ITFG1Q8TB96 612 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 SCLT1Q96NL6 688 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 LSM14BQ9BX40 385 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 CHST12Q9NRB3 414 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 FAM105AQ9NUU6 356 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 NDRG2Q9UN36 371 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 WASF3Q9UPY6 502 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 MRPS17Q9Y2R5 130 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 MAFBQ9Y5Q3 323 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
CLIP1-206ENST00000535290 DOCK6Q96HP0 2047 aa9.39□□□□□ -0.91
CLIP1-206ENST00000535290 F8W810 466 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 TAF4O00268 1085 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 MEIS1O00470 390 aa9.38□□□□□ -0.91
CLIP1-206ENST00000535290 IFIT3O14879 490 aaKnown RBP9.38□□□□□ -0.91
CLIP1-206ENST00000535290 GIPC1O14908 333 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms