RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MYBL1P10243 752 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 NR1H3Q13133 447 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 NUDT18Q6ZVK8 323 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 GPD1LQ8N335 351 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 CAPN11Q9UMQ6 739 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 SYNMO15061 1565 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 IQCA1LA6NCM1 817 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 TRIM54Q9BYV2 358 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 NDFIP2Q9NV92 336 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 AFF4Q9UHB7 1163 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 SPATA31A3Q5VYP0 1347 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 PRR36Q9H6K5 1346 aa19.32■□□□□ 0.68
SFSWAP-203ENST00000535236 CYP27B1O15528 508 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 KIFC3Q9BVG8 833 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 SIK2Q9H0K1 926 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 NEUROG2Q9H2A3 272 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 ABCB6Q9NP58 842 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 PRDM5Q9NQX1 630 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 RBAKQ9NYW8 714 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 RRP15Q9Y3B9 282 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 CDHR2Q9BYE9 1310 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 CPDO75976 1380 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 CDK12Q9NYV4 1490 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 SYNDIG1LA6NDD5 238 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 AP3M2P53677 418 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 TEKT4Q8WW24 435 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 DDX56Q9NY93 547 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 TTC7AQ9ULT0 858 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 MYO1DO94832 1006 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 ROR1Q01973 937 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 RAET1EQ8TD07 263 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 SLC26A7Q8TE54 656 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 RPAP3Q9H6T3 665 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 BCAR1P56945 870 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 HDLBPQ00341 1268 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 GFPT1Q06210 699 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 MORF4L2Q15014 288 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 CYTH2Q99418 400 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 DHX35Q9H5Z1 703 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 TRIM33Q9UPN9 1127 aa19.31■□□□□ 0.68
SFSWAP-203ENST00000535236 TNPO2O14787 897 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 SPAG7O75391 227 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 RCAN1P53805 252 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 FAM102AQ5T9C2 384 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 THOC1Q96FV9 657 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 COG4Q9H9E3 785 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 ABHD10Q9NUJ1 306 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 PRCPP42785 496 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 GJB4Q9NTQ9 266 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 BARHL2Q9NY43 387 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 UBA6A0AVT1 1052 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 SNAP23O00161 211 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 ZNF235Q14590 738 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 THEMIS2Q5TEJ8 643 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 CYFIP1Q7L576 1253 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 TRIML2Q8N7C3 387 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 RBM46Q8TBY0 533 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 OXER1Q8TDS5 423 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 SH3TC2Q8TF17 1288 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 ELAC2Q9BQ52 826 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 BFARQ9NZS9 450 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 SLC9A2Q9UBY0 812 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 WDR19Q8NEZ3 1342 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 PFDN1O60925 122 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 DNAJC6O75061 913 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 KCNV1Q6PIU1 500 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 EPM2AIP1Q7L775 607 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 PPM1NQ8N819 430 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 DDX50Q9BQ39 737 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 MMEP08473 750 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 CASP1P29466 404 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 MRPS25P82663 173 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 DRAP1Q14919 205 aaPredicted RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 TXNRD1Q16881 649 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 EPHA10Q5JZY3 1008 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 TMEM60Q9H2L4 133 aa19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 AGO2Q9UKV8 859 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-203ENST00000535236 DEUP1Q05D60 604 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 SLFNL1Q499Z3 407 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 ENOSF1Q7L5Y1 443 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 ARHGEF5Q12774 1597 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 TRIM72Q6ZMU5 477 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 OR6J1Q8NGC5 347 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 HERC5Q9UII4 1024 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 TSR3Q9UJK0 312 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 KITP10721 976 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 HIBCHQ6NVY1 386 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 OR6P1Q8NGX9 317 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 NR1H4Q96RI1 486 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 EIF2AK1Q9BQI3 630 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 ASAP2O43150 1006 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 RMDN1Q96DB5 314 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 BTBD6Q96KE9 485 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 LY9Q9HBG7 655 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 MRPL40Q9NQ50 206 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 CASS4Q9NQ75 786 aa19.29■□□□□ 0.68
SFSWAP-203ENST00000535236 TJP2Q9UDY2 1190 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms