RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 ARHGEF19Q8IW93 802 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 SYCP3Q8IZU3 236 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 CCDC197Q8NCU1 140 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 BTBD6Q96KE9 485 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 ELAC2Q9BQ52 826 aaKnown RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 CXorf56Q9H5V9 222 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 A1CFQ9NQ94 594 aaKnown RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 DMAC2Q9NW81 257 aa11.07□□□□□ -0.64
DDB1-204ENST00000535147 DBR1Q9UK59 544 aaKnown RBP11.07□□□□□ -0.64
DDB1-204ENST00000535147 G3V3G9 751 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 COMTP21964 271 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 BFSP1Q12934 665 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 VPS72Q15906 364 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 LACTB2Q53H82 288 aaPredicted RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 CCDC137Q6PK04 289 aaKnown RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 ARMC9Q7Z3E5 817 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 CCDC25Q86WR0 208 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 LMO3Q8TAP4 145 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 PGM2Q96G03 612 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 MKNK1Q9BUB5 465 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 DBNDD1Q9H9R9 158 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 GGT7Q9UJ14 662 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 DIS3Q9Y2L1 958 aaKnown RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 CCT8L1PA6NM43 557 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 CCDC169A6NNP5 214 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 PHF2O75151 1096 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 PYGMP11217 842 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 KIF22Q14807 665 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 SLC15A2Q16348 729 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 NBPF9Q3BBW0 867 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 HHIPL2Q6UWX4 724 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 RPUSD2Q8IZ73 545 aaKnown RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 ZSWIM2Q8NEG5 633 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 CRAMP1Q96RY5 1269 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 POP1Q99575 1024 aaKnown RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 INTS9Q9NV88 658 aaKnown RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 SUGT1Q9Y2Z0 365 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 GREB1LQ9C091 1923 aaPredicted RBP11.06□□□□□ -0.64
DDB1-204ENST00000535147 C10orf71Q711Q0 1435 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 EMSYQ7Z589 1322 aa11.06□□□□□ -0.64
DDB1-204ENST00000535147 A0A1W2PRG0 241 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 FOXO6A8MYZ6 492 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PSMD10O75832 226 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 VIMP08670 466 aaKnown RBP11.05□□□□□ -0.64
DDB1-204ENST00000535147 GCLMP48507 274 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PPP3CAQ08209 521 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 XRCC4Q13426 336 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PPP1R7Q15435 360 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 HIBCHQ6NVY1 386 aaPredicted RBP11.05□□□□□ -0.64
DDB1-204ENST00000535147 TRMT1LQ7Z2T5 733 aaKnown RBP11.05□□□□□ -0.64
DDB1-204ENST00000535147 SP8Q8IXZ3 490 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 CENPTQ96BT3 561 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PCDHB18PQ96TA0 734 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 SH2D3AQ9BRG2 576 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PI4KBQ9UBF8 816 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 RASAL2Q9UJF2 1139 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PCDHA3Q9Y5H8 950 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PPIP5K2O43314 1243 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 GAS7O60861 476 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 GH2P01242 217 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 CCDC172P0C7W6 258 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 BMP3P12645 472 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 MMP14P50281 582 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 LRRC14Q15048 493 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PPP2R5EQ16537 467 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PREPLQ4J6C6 727 aaPredicted RBP11.05□□□□□ -0.64
DDB1-204ENST00000535147 FAM133BQ5BKY9 247 aaKnown RBP11.05□□□□□ -0.64
DDB1-204ENST00000535147 OTUD6AQ7L8S5 288 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 RHOT2Q8IXI1 618 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 CCDC105Q8IYK2 499 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 UBL4BQ8N7F7 174 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 ELMO3Q96BJ8 720 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 KDM4CQ9H3R0 1056 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PRR12Q9ULL5 1215 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 SRCAPQ6ZRS2 3230 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 DDX39AO00148 427 aaKnown RBP11.05□□□□□ -0.64
DDB1-204ENST00000535147 CREB1P16220 341 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 CHRNA3P32297 505 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 PEX5P50542 639 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 DRG2P55039 364 aaKnown RBP11.05□□□□□ -0.64
DDB1-204ENST00000535147 PPP2R5AQ15172 486 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 SPDYCQ5MJ68 293 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 DAW1Q8N136 415 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 MGARPQ8TDB4 240 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 TUFT1Q9NNX1 390 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDB1-204ENST00000535147 PKD2L1Q9P0L9 805 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
DDB1-204ENST00000535147 RIPK2O43353 540 aa11.04□□□□□ -0.64
DDB1-204ENST00000535147 SGPL1O95470 568 aa11.04□□□□□ -0.64
DDB1-204ENST00000535147 CYP3A4P08684 503 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms