RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ALDH5A1P51649 535 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-232ENST00000535094 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 NFIAQ12857 509 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 RUNDC3BQ96NL0 473 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 DDX4Q9NQI0 724 aaKnown RBP17.07■□□□□ 0.32
MCF2L-232ENST00000535094 PODXLO00592 558 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 RHOT2Q8IXI1 618 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 SYT2Q8N9I0 419 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-232ENST00000535094 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-232ENST00000535094 TBC1D22AQ8WUA7 517 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 ANAPC7Q9UJX3 599 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 FAM86B1E9PN63 330 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 UBAP1LF5GYI3 381 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 EML1O00423 815 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 FAM86B2P0C5J1 330 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 ATF7P17544 494 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-232ENST00000535094 RPA1P27694 616 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 ATP5DP30049 168 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 DHX34Q14147 1143 aaKnown RBP17.06■□□□□ 0.32
MCF2L-232ENST00000535094 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-232ENST00000535094 SPATA21Q7Z572 469 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 HAUS1Q96CS2 278 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 KIF13AQ9H1H9 1805 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 RASA4BC9J798 803 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 KIAA0391O15091 583 aaKnown RBP17.06■□□□□ 0.32
MCF2L-232ENST00000535094 RASA4O43374 803 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 MAPK4P31152 587 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 RINT1Q6NUQ1 792 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 DBNDD1Q9H9R9 158 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 CASZ1Q86V15 1759 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
MCF2L-232ENST00000535094 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 HES6Q96HZ4 224 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
MCF2L-232ENST00000535094 LAMB4A4D0S4 1761 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 NQO1P15559 274 aaKnown RBP17.05■□□□□ 0.32
MCF2L-232ENST00000535094 ATP2B4P23634 1241 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 RWDD2BP57060 319 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 HHATQ5VTY9 493 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 SAAL1Q96ER3 474 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 CDC42EP4Q9H3Q1 356 aaKnown RBP17.05■□□□□ 0.32
MCF2L-232ENST00000535094 TMEM59LQ9UK28 342 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 F5H6K3 240 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 MSH4O15457 936 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 GH1P01241 217 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 MXI1P50539 228 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 KLRC3Q07444 240 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 DAB2IPQ5VWQ8 1189 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 GLT8D2Q9H1C3 349 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 PPFIA2O75334 1257 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 SGPL1O95470 568 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 HARSP12081 509 aaKnown RBP17.05■□□□□ 0.32
MCF2L-232ENST00000535094 CALRP27797 417 aaKnown RBP17.05■□□□□ 0.32
MCF2L-232ENST00000535094 PRELID2Q8N945 189 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 P3H4Q92791 437 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 FAM84AQ96KN4 292 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 ALG13Q9NP73 1137 aaKnown RBP17.05■□□□□ 0.32
MCF2L-232ENST00000535094 TAF1P21675 1872 aa17.05■□□□□ 0.32
MCF2L-232ENST00000535094 ASTN1O14525 1302 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 ANKRD63C9JTQ0 380 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 GOLGA8SH3BPF8 625 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 GOLGA8MH3BSY2 632 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 DNAJC3Q13217 504 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 DUPD1Q68J44 220 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 CROCCP2Q86T23 111 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 PRUNE1Q86TP1 453 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 PASD1Q8IV76 773 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 TEKT1Q969V4 418 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 CDCA7Q9BWT1 371 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-232ENST00000535094 DCTN4Q9UJW0 460 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 COG5Q9UP83 839 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 ALDH3A1P30838 453 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 DCAF12L1Q5VU92 463 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 RFX8Q6ZV50 586 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 C4orf33Q8N1A6 199 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 RBM17Q96I25 401 aaKnown RBP17.04■□□□□ 0.32
MCF2L-232ENST00000535094 ZNF577Q9BSK1 485 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 TRAF3IP3Q9Y228 551 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 PITPNM2Q9BZ72 1349 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 RIPK2O43353 540 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 KIF1CO43896 1103 aaKnown RBP17.04■□□□□ 0.32
MCF2L-232ENST00000535094 COILP38432 576 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-232ENST00000535094 RHBDL3P58872 404 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 CAPRIN2Q6IMN6 1127 aaKnown RBP17.04■□□□□ 0.32
MCF2L-232ENST00000535094 FAM228AQ86W67 206 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
MCF2L-232ENST00000535094 MYO3BQ8WXR4 1341 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 MIF4GDA9UHW6 222 aaKnown RBP17.03■□□□□ 0.32
MCF2L-232ENST00000535094 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 GAP43P17677 238 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 DLG4P78352 724 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 ERP27Q96DN0 273 aa17.03■□□□□ 0.32
MCF2L-232ENST00000535094 TMEM237Q96Q45 408 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms