RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 RFPL2O75678 378 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 DCNP07585 359 aaKnown RBP17.8■□□□□ 0.44
RPS3-220ENST00000534555 SPATA31D3P0C874 917 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 RFX1P22670 979 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 USP11P51784 963 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 RCAN1P53805 252 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 FGD1P98174 961 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 TSGA10IPQ3SY00 556 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 PLA2G4FQ68DD2 849 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 SPATA31D4Q6ZUB0 917 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 Q6ZUG5 572 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 MRPL10Q7Z7H8 261 aaKnown RBP17.8■□□□□ 0.44
RPS3-220ENST00000534555 CMASQ8NFW8 434 aaPredicted RBP17.8■□□□□ 0.44
RPS3-220ENST00000534555 TBC1D17Q9HA65 648 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 RSAD1Q9HA92 442 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 IFT122Q9HBG6 1241 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 WDR6Q9NNW5 1121 aaKnown RBP17.8■□□□□ 0.44
RPS3-220ENST00000534555 AGPAT5Q9NUQ2 364 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 MARCH5Q9NX47 278 aa17.8■□□□□ 0.44
RPS3-220ENST00000534555 PRG3Q9Y2Y8 225 aaPredicted RBP17.8■□□□□ 0.44
RPS3-220ENST00000534555 CCDC196A0A1B0GTZ2 297 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 SOD2P04179 222 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 POTEGQ6S5H5 508 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 B3GNT9Q6UX72 402 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 ANO5Q75V66 913 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 ZNF579Q8NAF0 562 aaKnown RBP17.79■□□□□ 0.44
RPS3-220ENST00000534555 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 TBCKQ8TEA7 893 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 RPS6KC1Q96S38 1066 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 TMEM175Q9BSA9 504 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 HERC2P3Q9BVR0 1158 aa17.79■□□□□ 0.44
RPS3-220ENST00000534555 CLUHO75153 1309 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 GVINP1Q7Z2Y8 2422 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 TDP2O95551 362 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 URODP06132 367 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 NPEPPSP55786 919 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
RPS3-220ENST00000534555 NTRK3Q16288 839 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 DGLUCYQ7Z3D6 616 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 RDM1Q8NG50 284 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 GPR152Q8TDT2 470 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 BRF1Q92994 677 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 SLC26A6Q9BXS9 759 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 MINDY3Q9H8M7 445 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 EPS15L1Q9UBC2 864 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 STK39Q9UEW8 545 aa17.78■□□□□ 0.44
RPS3-220ENST00000534555 F8W810 466 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 SRGAP2CP0DJJ0 459 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 SRFP11831 508 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 HOXA11P31270 313 aaPredicted RBP17.77■□□□□ 0.44
RPS3-220ENST00000534555 OR1G1P47890 313 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 Q4G0T1 1027 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 KIAA0319Q5VV43 1072 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 DCLK2Q8N568 766 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 CCDC148Q8NFR7 591 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 SMG7Q92540 1137 aaKnown RBP17.77■□□□□ 0.44
RPS3-220ENST00000534555 STAMQ92783 540 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 ZNF707Q96C28 371 aaPredicted RBP17.77■□□□□ 0.44
RPS3-220ENST00000534555 SEMA4AQ9H3S1 761 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 DLGAP2Q9P1A6 1054 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 KANSL3Q9P2N6 904 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 COL4A3BPQ9Y5P4 624 aa17.77■□□□□ 0.44
RPS3-220ENST00000534555 GLUD1P00367 558 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 ADH1AP07327 375 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 SP9P0CG40 484 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 NLRP5P59047 1200 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 KRT32Q14532 448 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 NONOQ15233 471 aaKnown RBP eCLIP17.76■□□□□ 0.43
RPS3-220ENST00000534555 PALB2Q86YC2 1186 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 RNF168Q8IYW5 571 aaPredicted RBP17.76■□□□□ 0.43
RPS3-220ENST00000534555 SMG8Q8ND04 991 aaKnown RBP17.76■□□□□ 0.43
RPS3-220ENST00000534555 TMEM143Q96AN5 459 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 HINFPQ9BQA5 517 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 RNF39Q9H2S5 420 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 RXFP1Q9HBX9 757 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 BMP2KQ9NSY1 1161 aaPredicted RBP17.76■□□□□ 0.43
RPS3-220ENST00000534555 MIOSQ9NXC5 875 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 SIT1Q9Y3P8 196 aa17.76■□□□□ 0.43
RPS3-220ENST00000534555 CNTNAP2Q9UHC6 1331 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 DOCK8Q8NF50 2099 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 POTEMA6NI47 508 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 EML1O00423 815 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 EFEMP2O95967 443 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 HMGB1P09429 215 aaKnown RBP17.75■□□□□ 0.43
RPS3-220ENST00000534555 GLULP15104 373 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 NCLP19338 710 aaKnown RBP17.75■□□□□ 0.43
RPS3-220ENST00000534555 GLUD2P49448 558 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 PSMC5P62195 406 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 GET4Q7L5D6 327 aaPredicted RBP17.75■□□□□ 0.43
RPS3-220ENST00000534555 GLYCTKQ8IVS8 523 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 ETNPPLQ8TBG4 499 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 PRPF31Q8WWY3 499 aaKnown RBP17.75■□□□□ 0.43
RPS3-220ENST00000534555 B3GALT6Q96L58 329 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 EIF2AQ9BY44 585 aaKnown RBP17.75■□□□□ 0.43
RPS3-220ENST00000534555 RNF26Q9BY78 433 aaPredicted RBP17.75■□□□□ 0.43
RPS3-220ENST00000534555 FOXQ1Q9C009 403 aa17.75■□□□□ 0.43
RPS3-220ENST00000534555 NT5C3AQ9H0P0 336 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms