RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	GYS1	P13807	737 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	TMED2	Q15363	201 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	PHLDB3	Q6NSJ2	640 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	TAC1	P20366	129 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ST8SIA6	P61647	398 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	DR1	Q01658	176 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	EFHB	Q8N7U6	833 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	INTS9	Q9NV88	658 aa	Known RBP	16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	HEY1	Q9Y5J3	304 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	LMTK2	Q8IWU2	1503 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	NME3	Q13232	169 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	STIL	Q15468	1287 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	FRA10AC1	Q70Z53	315 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	RABGGTA	Q92696	567 aa		16.78	■□□□□ 0.28
NCAPD3-213	ENST00000534532	TTC36	A6NLP5	189 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532		H3BRJ5	948 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	CD4	P01730	458 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	MYBL1	P10243	752 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SNX17	Q15036	470 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ITPRIPL1	Q6GPH6	555 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	TMEM143	Q96AN5	459 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ATG4C	Q96DT6	458 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SLC13A4	Q9UKG4	626 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	AGAP1	Q9UPQ3	857 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	PRRG1	O14668	218 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	EVI5	O60447	810 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	PRCP	P42785	496 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ATP2C1	P98194	919 aa	Predicted RBP	16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	SIK2	Q9H0K1	926 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	RGL1	Q9NZL6	768 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	IP6K2	Q9UHH9	426 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	DCDC2C	A8MYV0	355 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ZNF189	O75820	626 aa	Predicted RBP	16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	ATP1A2	P50993	1020 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	KRT17	Q04695	432 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	TRIM67	Q6ZTA4	783 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	RNF10	Q8N5U6	811 aa	Known RBP	16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	GPATCH11	Q8N954	259 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	CDC26	Q8NHZ8	85 aa		16.77	■□□□□ 0.28
NCAPD3-213	ENST00000534532	IQANK1	A0A1B0GTG1	560 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	EXOC1L	A0A1B0GW35	172 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	SOWAHD	A6NJG2	315 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	RASA1	P20936	1047 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PTPN21	Q16825	1174 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	WDR72	Q3MJ13	1102 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	FAM102A	Q5T9C2	384 aa	Predicted RBP	16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PPP1R12C	Q9BZL4	782 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	TRPC7	Q9HCX4	862 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	LAMC1	P11047	1609 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	STAG3L1	P0CL83	205 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	CXCR5	P32302	372 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	DCP1B	Q8IZD4	617 aa	Known RBP	16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	MED4	Q9NPJ6	270 aa		16.77	■□□□□ 0.27
NCAPD3-213	ENST00000534532	NCOA3	Q9Y6Q9	1424 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	TRIM49B	A6NDI0	452 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	DHX9	Q08211	1270 aa	Known RBP	16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PLEKHH3	Q7Z736	793 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	AGL	P35573	1532 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	SLC26A4	O43511	780 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	TMEM132D	Q14C87	1099 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	ARRDC4	Q8NCT1	418 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	EDEM3	Q9BZQ6	932 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	KCND2	Q9NZV8	630 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	ARHGEF40	Q8TER5	1519 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	SYNGAP1	Q96PV0	1343 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	DLC1	Q96QB1	1528 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PPP2R3B	Q9Y5P8	575 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	ARL4C	P56559	192 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	ZNF235	Q14590	738 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	NAA25	Q14CX7	972 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	EMC2	Q15006	297 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	CLEC10A	Q8IUN9	316 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	TTC30B	Q8N4P2	665 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	HINFP	Q9BQA5	517 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PCSK1N	Q9UHG2	260 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	SNX9	Q9Y5X1	595 aa		16.76	■□□□□ 0.27
NCAPD3-213	ENST00000534532	EMSY	Q7Z589	1322 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PDXK	O00764	312 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	MFAP3L	O75121	409 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PDHB	P11177	359 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	TAP1	Q03518	808 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	DRAP1	Q14919	205 aa	Predicted RBP	16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	KSR1	Q8IVT5	923 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	FGD4	Q96M96	766 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	SCAF8	Q9UPN6	1271 aa	Known RBP	16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	FIS1	Q9Y3D6	152 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	SETBP1	Q9Y6X0	1596 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PDS5A	Q29RF7	1337 aa	Known RBP	16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	ZC3H4	Q9UPT8	1303 aa	Known RBP	16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	CCDC188	H7C350	402 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	HSD17B4	P51659	736 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	CFAP61	Q8NHU2	1237 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	RIT2	Q99578	217 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	MOV10L1	Q9BXT6	1211 aa	Known RBP	16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PP2D1	A8MPX8	630 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	KRT37	O76014	449 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	TSGA10IP	Q3SY00	556 aa		16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	HEATR6	Q6AI08	1181 aa	Known RBP	16.75	■□□□□ 0.27
NCAPD3-213	ENST00000534532	PRMT7	Q9NVM4	692 aa	Predicted RBP	16.75	■□□□□ 0.27

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms