RNA–Protein interactions for RNA: ENST00000534435.1

SHARPIN-210, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-210ENST00000534435 PLPPR4Q7Z2D5 763 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 ZNF280BQ86YH2 543 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 CCDC60Q8IWA6 550 aaPredicted RBP9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 LRRC71Q8N4P6 559 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 METTL13Q8N6R0 699 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 SMG7Q92540 1137 aaKnown RBP9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 NELL1Q92832 810 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 FGF14Q92915 247 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 MYL10Q9BUA6 226 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 DSCC1Q9BVC3 393 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 ZSCAN16Q9H4T2 348 aaPredicted RBP9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 SLC2A4RGQ9NR83 387 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 TBC1D13Q9NVG8 400 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 ZSCAN32Q9NX65 697 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 FBXO4Q9UKT5 387 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 ZMIZ1Q9ULJ6 1067 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 IRAK3Q9Y616 596 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 ASPMQ8IZT6 3477 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 ZZEF1O43149 2961 aa9.45□□□□□ -0.9
SHARPIN-210ENST00000534435 FAM208BQ5VWN6 2430 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 SETXQ7Z333 2677 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 KANSL1LA0AUZ9 987 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 F8W810 466 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 HOXA2O43364 376 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 LILRB3O75022 631 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 TPM2P07951 284 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 LAMP2P13473 410 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 SPINK2P20155 84 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 NLRP11P59045 1033 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 CCDC6Q16204 474 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 ME3Q16798 604 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 CCDC178Q5BJE1 867 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 LARP1BQ659C4 914 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 C15orf39Q6ZRI6 1047 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 PRR23BQ6ZRT6 265 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 NETO1Q8TDF5 533 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 SECISBP2LQ93073 1101 aaKnown RBP9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 BCO2Q9BYV7 579 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 ADAMTS10Q9H324 1103 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 JADE2Q9NQC1 790 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 KCNH7Q9NS40 1196 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 RXFP3Q9NSD7 469 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 SEMA4GQ9NTN9 838 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 GMEB2Q9UKD1 530 aa9.44□□□□□ -0.9
SHARPIN-210ENST00000534435 SHISA7A6NL88 538 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 BACH1O14867 736 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 TEX28O15482 410 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 OFD1O75665 1012 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 DDHD2O94830 711 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 POLGP54098 1239 aaPredicted RBP9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 HMGN5P82970 282 aaKnown RBP9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 MTAPQ13126 283 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 NONOQ15233 471 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 MLF2Q15773 248 aaPredicted RBP9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 ADCK5Q3MIX3 580 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 SLC44A4Q53GD3 710 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 PRR23CQ6ZRP0 262 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 GLYCTKQ8IVS8 523 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 CCDC83Q8IWF9 413 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 CUL5Q93034 780 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 CDHR1Q96JP9 859 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 KXD1Q9BQD3 176 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 DDX23Q9BUQ8 820 aaKnown RBP9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 LTB4R2Q9NPC1 389 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 TPCN1Q9ULQ1 816 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 ZKSCAN5Q9Y2L8 839 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 TAF6LQ9Y6J9 622 aa9.43□□□□□ -0.9
SHARPIN-210ENST00000534435 IGKV6D-21A0A0A0MT36 114 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 A0A0U1RQF3 1178 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 TBC1D4O60343 1298 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 HBP1O60381 514 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 TOP3BO95985 862 aaKnown RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PROS1P07225 676 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 TDGF1P13385 188 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 ZSCAN20P17040 1043 aaPredicted RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 TROAPQ12815 778 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 FZD5Q13467 585 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 SWSAP1Q6NVH7 229 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PDXDC2PQ6P474 469 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 DHX32Q7L7V1 743 aaKnown RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PPFIBP1Q86W92 1011 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PALB2Q86YC2 1186 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 CMASQ8NFW8 434 aaPredicted RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 GTF3C6Q969F1 213 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 EMILIN2Q9BXX0 1053 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PIDD1Q9HB75 910 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 AGO4Q9HCK5 861 aaKnown RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PRMT8Q9NR22 394 aaPredicted RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 DDX19AQ9NUU7 478 aaKnown RBP9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 CFAP45Q9UL16 551 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PCDHA6Q9UN73 950 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
SHARPIN-210ENST00000534435 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms