RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 KCNK5O95279 499 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 CNPP09543 421 aaKnown RBP7.4□□□□□ -1.22
CD44-237ENST00000534082 PARP1P09874 1014 aaKnown RBP7.4□□□□□ -1.22
CD44-237ENST00000534082 TDGF1P13385 188 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 KCNA2P16389 499 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 RPS9P46781 194 aaKnown RBP7.4□□□□□ -1.22
CD44-237ENST00000534082 RBM25P49756 843 aaKnown RBP7.4□□□□□ -1.22
CD44-237ENST00000534082 NRLP54845 237 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 HAND2P61296 217 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 MTAPQ13126 283 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 PKDCCQ504Y2 493 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 SLC44A4Q53GD3 710 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 ZBTB41Q5SVQ8 909 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 PSAPL1Q6NUJ1 521 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 MTHFD1LQ6UB35 978 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 RSPO2Q6UXX9 243 aaPredicted RBP7.4□□□□□ -1.22
CD44-237ENST00000534082 CYP26C1Q6V0L0 522 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 DGKHQ86XP1 1220 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 ECHDC2Q86YB7 292 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 SMG7Q92540 1137 aaKnown RBP7.4□□□□□ -1.22
CD44-237ENST00000534082 TNPO1Q92973 898 aaKnown RBP7.4□□□□□ -1.22
CD44-237ENST00000534082 CLDN23Q96B33 292 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 IGSF21Q96ID5 467 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 PPP1R16BQ96T49 567 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 PCYT2Q99447 389 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 OSMRQ99650 979 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 VN1R3Q9BXE9 311 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.4□□□□□ -1.22
CD44-237ENST00000534082 NEDD4P46934 1319 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 FAM187AA6NFU0 413 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 RFPL2O75678 378 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 SSBP05455 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
CD44-237ENST00000534082 PCP11498 1178 aaKnown RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 PRKCSHP14314 528 aaPredicted RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 SPINK2P20155 84 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 CRYBB1P53674 252 aaPredicted RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 GUCA2AQ02747 115 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 SIM2Q14190 667 aaPredicted RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 SF3A2Q15428 464 aaKnown RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 ALX1Q15699 326 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 KIZQ2M2Z5 673 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 PCNX4Q63HM2 1172 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 ELMSAN1Q6PJG2 1045 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 PARM1Q6UWI2 310 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 TPRG1Q6ZUI0 275 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 HOMER1Q86YM7 354 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 TBC1D10CQ8IV04 446 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 PANK1Q8TE04 598 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 GATA6Q92908 595 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 FGF14Q92915 247 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 ZNF707Q96C28 371 aaPredicted RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 GPRASP2Q96D09 838 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 MTMR8Q96EF0 704 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 RPP25Q9BUL9 199 aaKnown RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 AZI2Q9H6S1 392 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 FAM217BQ9NTX9 383 aaPredicted RBP7.39□□□□□ -1.23
CD44-237ENST00000534082 PKD2L1Q9P0L9 805 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 MYH15Q9Y2K3 1946 aa7.39□□□□□ -1.23
CD44-237ENST00000534082 CARNS1A5YM72 827 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 NCAM2O15394 837 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 ZBTB24O43167 697 aaPredicted RBP7.38□□□□□ -1.23
CD44-237ENST00000534082 FGAP02671 866 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 MYBP10242 640 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 ZSCAN20P17040 1043 aaPredicted RBP7.38□□□□□ -1.23
CD44-237ENST00000534082 KLRC1P26715 233 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 PFKPQ01813 784 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 ZNF252P-AS1Q0IIN9 211 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 TRAF1Q13077 416 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 SRSF5Q13243 272 aaKnown RBP7.38□□□□□ -1.23
CD44-237ENST00000534082 PPP2R5DQ14738 602 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 MSS51Q4VC12 460 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 SOWAHCQ53LP3 525 aaPredicted RBP7.38□□□□□ -1.23
CD44-237ENST00000534082 STPG1Q5TH74 334 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 MFSD6Q6ZSS7 791 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 KIAA0319LQ8IZA0 1049 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 ESR2Q92731 530 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 PHKBQ93100 1093 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 CDHR1Q96JP9 859 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 PIDD1Q9HB75 910 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 MRPL17Q9NRX2 175 aaKnown RBP7.38□□□□□ -1.23
CD44-237ENST00000534082 RXFP3Q9NSD7 469 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 DPP7Q9UHL4 492 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 WASF3Q9UPY6 502 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 ZFP37Q9Y6Q3 630 aaPredicted RBP7.38□□□□□ -1.23
CD44-237ENST00000534082 LAMA1P25391 3075 aa7.38□□□□□ -1.23
CD44-237ENST00000534082 ZMYM6O95789 1325 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 CELSR3Q9NYQ7 3312 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 KLRF2D3W0D1 207 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 C2CD2LO14523 706 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 LILRB3O75022 631 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 GLUD1P00367 558 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 VTNP04004 478 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 URODP06132 367 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 ADH1AP07327 375 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 GALTP07902 379 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 ITGB5P18084 799 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 SLC11A1P49279 550 aa7.37□□□□□ -1.23
CD44-237ENST00000534082 AK2P54819 239 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms