RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 RNF19AQ9NV58 838 aa17.49■□□□□ 0.39
TSKU-204ENST00000533752 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
TSKU-204ENST00000533752 PRRC2BQ5JSZ5 2229 aaKnown RBP17.49■□□□□ 0.39
TSKU-204ENST00000533752 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
TSKU-204ENST00000533752 HIP1RO75146 1068 aa17.48■□□□□ 0.39
TSKU-204ENST00000533752 YEATS4O95619 227 aa17.48■□□□□ 0.39
TSKU-204ENST00000533752 ARF4P18085 180 aaPredicted RBP17.48■□□□□ 0.39
TSKU-204ENST00000533752 PLCG1P19174 1290 aa17.48■□□□□ 0.39
TSKU-204ENST00000533752 MRPL10Q7Z7H8 261 aaKnown RBP17.48■□□□□ 0.39
TSKU-204ENST00000533752 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
TSKU-204ENST00000533752 HELQQ8TDG4 1101 aa17.48■□□□□ 0.39
TSKU-204ENST00000533752 TRIM6Q9C030 488 aaPredicted RBP17.48■□□□□ 0.39
TSKU-204ENST00000533752 FZD8Q9H461 694 aa17.48■□□□□ 0.39
TSKU-204ENST00000533752 STK17AQ9UEE5 414 aa17.48■□□□□ 0.39
TSKU-204ENST00000533752 N4BP3O15049 544 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 PPP6R2O75170 966 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 PRKCBP05771 671 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
TSKU-204ENST00000533752 PPM1AP35813 382 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 PRPF4BQ13523 1007 aaKnown RBP17.47■□□□□ 0.39
TSKU-204ENST00000533752 KARSQ15046 597 aaKnown RBP17.47■□□□□ 0.39
TSKU-204ENST00000533752 TMEM132AQ24JP5 1023 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 UBXN11Q5T124 520 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 SLC27A1Q6PCB7 646 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 APBB1IPQ7Z5R6 666 aaPredicted RBP17.47■□□□□ 0.39
TSKU-204ENST00000533752 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 URGCPQ8TCY9 931 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 RAD54LQ92698 747 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 SYMPKQ92797 1274 aaKnown RBP17.47■□□□□ 0.39
TSKU-204ENST00000533752 CPB2Q96IY4 423 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 CCDC113Q9H0I3 377 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 RSAD1Q9HA92 442 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 TYW1Q9NV66 732 aaKnown RBP17.47■□□□□ 0.39
TSKU-204ENST00000533752 ODF2LQ9ULJ1 636 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
TSKU-204ENST00000533752 MYH15Q9Y2K3 1946 aa17.47■□□□□ 0.39
TSKU-204ENST00000533752 ZMYM2Q9UBW7 1377 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 A0A1B0GUA9 196 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 CCDC169A6NNP5 214 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 ACKR2O00590 384 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 SPTLC2O15270 562 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 B4GALT5O43286 388 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 NPTX2P47972 431 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 SMTNP53814 917 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 PEX3P56589 373 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 UBE3AQ05086 875 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 MAPK7Q13164 816 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 CCDC85BQ15834 202 aaPredicted RBP17.46■□□□□ 0.39
TSKU-204ENST00000533752 NOMO2Q5JPE7 1267 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
TSKU-204ENST00000533752 GPBP1Q86WP2 473 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 DAW1Q8N136 415 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 COLGALT1Q8NBJ5 622 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 KCNG4Q8TDN1 519 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 SPIRE2Q8WWL2 714 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
TSKU-204ENST00000533752 LARP4BQ92615 738 aaKnown RBP17.46■□□□□ 0.39
TSKU-204ENST00000533752 LPPQ93052 612 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 ZNF558Q96NG5 402 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 ADPGKQ9BRR6 497 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 KMT5AQ9NQR1 393 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 PLAGL2Q9UPG8 496 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 IPPQ9Y573 584 aa17.46■□□□□ 0.39
TSKU-204ENST00000533752 H0YCG3 227 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 ITGA4P13612 1032 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 PLS3P13797 630 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 SCP2P22307 547 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■■■■□ 22.2
TSKU-204ENST00000533752 THNSL1Q8IYQ7 743 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 KLHL23Q8NBE8 558 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 SLC17A8Q8NDX2 589 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 CLIC6Q96NY7 704 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 KIFC3Q9BVG8 833 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 EIF2AQ9BY44 585 aaKnown RBP17.45■□□□□ 0.38
TSKU-204ENST00000533752 TMEM134Q9H6X4 195 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 CWH43Q9H720 699 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 BLOC1S4Q9NUP1 217 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 LARSQ9P2J5 1176 aaKnown RBP17.45■□□□□ 0.38
TSKU-204ENST00000533752 ARHGAP28Q9P2N2 729 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 KANSL3Q9P2N6 904 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 CFAP45Q9UL16 551 aa17.45■□□□□ 0.38
TSKU-204ENST00000533752 KIAA1671Q9BY89 1806 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 K7ERI5 159 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 GRM6O15303 877 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 OFD1O75665 1012 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 ITGB1P05556 798 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 KRT18P05783 430 aaKnown RBP17.44■□□□□ 0.38
TSKU-204ENST00000533752 RNASELQ05823 741 aaKnown RBP17.44■□□□□ 0.38
TSKU-204ENST00000533752 SKIV2LQ15477 1246 aaKnown RBP17.44■□□□□ 0.38
TSKU-204ENST00000533752 DCAF4L1Q3SXM0 396 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 SPECC1Q5M775 1068 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 RRAGBQ5VZM2 374 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 AGMOQ6ZNB7 445 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 LRRC55Q6ZSA7 311 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 SMG8Q8ND04 991 aaKnown RBP17.44■□□□□ 0.38
TSKU-204ENST00000533752 PPP2R3CQ969Q6 453 aa17.44■□□□□ 0.38
TSKU-204ENST00000533752 NSUN3Q9H649 340 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms