RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ARL4CP56559 192 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 ZNF543Q08ER8 600 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 DRP2Q13474 957 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 MXD4Q14582 209 aaPredicted RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 BARGINQ6ZT62 677 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 ENOSF1Q7L5Y1 443 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 DDX53Q86TM3 631 aaKnown RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 CLEC10AQ8IUN9 316 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 GLYCTKQ8IVS8 523 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 CCDC197Q8NCU1 140 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 SEPT1Q8WYJ6 367 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 PPWD1Q96BP3 646 aaKnown RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 SH2D3AQ9BRG2 576 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 HEMGNQ9BXL5 484 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 INTS2Q9H0H0 1204 aaKnown RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 TUFT1Q9NNX1 390 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 DNAJC17Q9NVM6 304 aaKnown RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 CAPN7Q9Y6W3 813 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 RPS6KA5O75582 802 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 PLS3P13797 630 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 RPS12P25398 132 aaKnown RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 FCGRTP55899 365 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 ZSCAN26Q16670 478 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 RABL6Q3YEC7 729 aaPredicted RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 ATG9AQ7Z3C6 839 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 TJP2Q9UDY2 1190 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 SYNGAP1Q96PV0 1343 aa6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 KDM6AO15550 1401 aaPredicted RBP6.81□□□□□ -1.32
UBQLN1-206ENST00000533705 PRRG1O14668 218 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 DGAT1O75907 488 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SLC25A27O95847 323 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ALDH1A1P00352 501 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 NR3C2P08235 984 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SESN3P58005 492 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 TTC19Q6DKK2 380 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SCYL3Q8IZE3 742 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 GUF1Q8N442 669 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 TMEM143Q96AN5 459 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SH3KBP1Q96B97 665 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 CALR3Q96L12 384 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 CYP26B1Q9NR63 512 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 LRRC53A6NM62 1247 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 PP2D1A8MPX8 630 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 F5H423 210 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 PODXLO00592 558 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SNX2O60749 519 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 KRT7P08729 469 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 LCP1P13796 627 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 OCRLQ01968 901 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ITPK1Q13572 414 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 DRAP1Q14919 205 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ZNF467Q7Z7K2 595 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 GAS2L3Q86XJ1 694 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 WHAMMQ8TF30 809 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 GLT1D1Q96MS3 346 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 VCPKMTQ9H867 229 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 RGL1Q9NZL6 768 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 KIAA0391O15091 583 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 FAM102AQ5T9C2 384 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 LMBRD2Q68DH5 695 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 TRIM72Q6ZMU5 477 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 RNF180Q86T96 592 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 FBXL13Q8NEE6 735 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ZMYND12Q9H0C1 365 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SAYSD1Q9NPB0 183 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ORC6Q9Y5N6 252 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SPATA31A5Q5VU36 1347 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SPATA31A7Q8IWB4 1347 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 TMEM247A6NEH6 219 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 MAGEB2O15479 319 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 CTNND1O60716 968 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 CDK17Q00537 523 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SBK1Q52WX2 424 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 HABP4Q5JVS0 413 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 HEATR6Q6AI08 1181 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 PPP4R4Q6NUP7 873 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 RNF25Q96BH1 459 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 DDX50Q9BQ39 737 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 EFHD1Q9BUP0 239 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 TIPINQ9BVW5 301 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 IP6K2Q9UHH9 426 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ZC3H4Q9UPT8 1303 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 WDR91A4D1P6 747 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 STXBP3O00186 592 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 PALMO75781 387 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 CLTAP09496 248 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 EIF3BP55884 814 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 BCAR1P56945 870 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ST8SIA6P61647 398 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 CDR2Q01850 454 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 WDR72Q3MJ13 1102 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ATG16L1Q676U5 607 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ITPRIPL1Q6GPH6 555 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 GLB1LQ6UWU2 654 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 SRBD1Q8N5C6 995 aaKnown RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ZNF564Q8TBZ8 553 aaPredicted RBP6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 EXOC4Q96A65 974 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 RMDN2Q96LZ7 410 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 ZBTB18Q99592 522 aa6.8□□□□□ -1.32
UBQLN1-206ENST00000533705 DHX35Q9H5Z1 703 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms