RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PDE12Q6L8Q7 609 aaKnown RBP10.89□□□□□ -0.67
NUP98-220ENST00000533346 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 CABP7Q86V35 215 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 GDPD5Q8WTR4 605 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 CSRNP2Q9H175 543 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 GPRC5CQ9NQ84 441 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
NUP98-220ENST00000533346 KANSL3Q9P2N6 904 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 FBXO2Q9UK22 296 aaPredicted RBP10.89□□□□□ -0.67
NUP98-220ENST00000533346 PCDHB2Q9Y5E7 798 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 CLIC4Q9Y696 253 aa10.89□□□□□ -0.67
NUP98-220ENST00000533346 INO80B-WBP1J3KQ70 363 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 PPP6R2O75170 966 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 ITGB1P05556 798 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 FGFR1P11362 822 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 COL9A1P20849 921 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 UBA7P41226 1012 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 GATMP50440 423 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 MAPK7Q13164 816 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 AGMOQ6ZNB7 445 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 ZBTB8OSQ8IWT0 167 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 ABI1Q8IZP0 508 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 DAW1Q8N136 415 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 KLHL23Q8NBE8 558 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 COLGALT1Q8NBJ5 622 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 SMG8Q8ND04 991 aaKnown RBP10.88□□□□□ -0.67
NUP98-220ENST00000533346 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 BSNDQ8WZ55 320 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 TTC28Q96AY4 2481 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 CALML4Q96GE6 196 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 IFT74Q96LB3 600 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 DRC1Q96MC2 740 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 USP28Q96RU2 1077 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 NSUN3Q9H649 340 aaKnown RBP10.88□□□□□ -0.67
NUP98-220ENST00000533346 BLOC1S4Q9NUP1 217 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 ARHGAP28Q9P2N2 729 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 MTUS1Q9ULD2 1270 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 ODF2LQ9ULJ1 636 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 GIT1Q9Y2X7 761 aa10.88□□□□□ -0.67
NUP98-220ENST00000533346 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
NUP98-220ENST00000533346 GRM6O15303 877 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 DDIT3P35638 169 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 PPM1AP35813 382 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 MAPK6Q16659 721 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 CTC1Q2NKJ3 1217 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 SLC27A1Q6PCB7 646 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 GLB1LQ6UWU2 654 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 LINC00301Q8NCQ3 95 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 TMEM175Q9BSA9 504 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 THEGQ9P2T0 379 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 STK39Q9UEW8 545 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 IPPQ9Y573 584 aa10.87□□□□□ -0.67
NUP98-220ENST00000533346 FSD2A1L4K1 749 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 LRRIQ4A6NIV6 560 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 FSCN2O14926 492 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 N4BP3O15049 544 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 YEATS4O95619 227 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 PLA2G4BP0C869 781 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 ZSCAN22P10073 491 aaPredicted RBP10.86□□□□□ -0.67
NUP98-220ENST00000533346 NPTX2P47972 431 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 ZNF131P52739 623 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 GRIN1Q05586 938 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 AAK1Q2M2I8 961 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 PAN2Q504Q3 1202 aaKnown RBP10.86□□□□□ -0.67
NUP98-220ENST00000533346 ARSHQ5FYA8 562 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 NOMO2Q5JPE7 1267 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 MAEAQ7L5Y9 396 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 HACE1Q8IYU2 909 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 SLC39A11Q8N1S5 342 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 DEPTORQ8TB45 409 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 HELQQ8TDG4 1101 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 POF1BQ8WVV4 589 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 MRPS27Q92552 414 aaKnown RBP10.86□□□□□ -0.67
NUP98-220ENST00000533346 PABPC5Q96DU9 382 aaKnown RBP10.86□□□□□ -0.67
NUP98-220ENST00000533346 CDK5RAP3Q96JB5 506 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 ZNF396Q96N95 335 aaPredicted RBP10.86□□□□□ -0.67
NUP98-220ENST00000533346 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 RUSC1Q9BVN2 902 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 RSAD1Q9HA92 442 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 PTPRHQ9HD43 1115 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 TBC1D13Q9NVG8 400 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 STK17AQ9UEE5 414 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 TNFSF13BQ9Y275 285 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 IRAK3Q9Y616 596 aa10.86□□□□□ -0.67
NUP98-220ENST00000533346 MEIS3P2A8K0S8 358 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 H0YCG3 227 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 K7ERI5 159 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 HIP1RO75146 1068 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 FGF18O76093 207 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 BRD1O95696 1058 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 EFEMP2O95967 443 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 F13A1P00488 732 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 PRKCBP05771 671 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 GALTP07902 379 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 ITGA4P13612 1032 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 PLS3P13797 630 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 DNAJB1P25685 340 aa10.85□□□□□ -0.67
NUP98-220ENST00000533346 ABCD1P33897 745 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms