RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 DPF3Q92784 378 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 APBB2Q92870 758 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 CCDC51Q96ER9 411 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 ZNF668Q96K58 619 aaPredicted RBP12.47□□□□□ -0.41
GMDS-210ENST00000533279 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 TRIM6Q9C030 488 aaPredicted RBP12.47□□□□□ -0.41
GMDS-210ENST00000533279 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 ADAMTS10Q9H324 1103 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 TBX20Q9UMR3 447 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 GDAQ9Y2T3 454 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 NR2E3Q9Y5X4 410 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 EVPLQ92817 2033 aa12.47□□□□□ -0.41
GMDS-210ENST00000533279 BECN2A8MW95 431 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 ACKR2O00590 384 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 PRPF6O94906 941 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 LRRC63Q05C16 580 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 EHHADHQ08426 723 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 NFX1Q12986 1120 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 HIC1Q14526 733 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 KYAT1Q16773 422 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 FAM187BQ17R55 369 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 DCAF4L1Q3SXM0 396 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 ARMCX5Q6P1M9 558 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 NOTUMQ6P988 496 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 ZPBP2Q6X784 338 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 C7orf61Q8IZ16 206 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 KIAA0895Q8NCT3 520 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 SEPT8Q92599 483 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 DHX38Q92620 1227 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 LBHD1Q9BQE6 289 aaPredicted RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 TYW1Q9NV66 732 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 CTNND2Q9UQB3 1225 aa12.46□□□□□ -0.41
GMDS-210ENST00000533279 PIN4Q9Y237 131 aaKnown RBP12.46□□□□□ -0.41
GMDS-210ENST00000533279 CNTNAP2Q9UHC6 1331 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 SMTNL1A8MU46 457 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 CLDN3O15551 220 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 PFKMP08237 780 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 GHRP10912 638 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 SKIP12755 728 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 ERCC5P28715 1186 aaPredicted RBP12.45□□□□□ -0.42
GMDS-210ENST00000533279 PRCPP42785 496 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 MBTD1Q05BQ5 628 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 MGAT3Q09327 533 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 BMT2Q1RMZ1 405 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 TRIM71Q2Q1W2 868 aaKnown RBP12.45□□□□□ -0.42
GMDS-210ENST00000533279 ZNF568Q3ZCX4 644 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 ZC2HC1CQ53FD0 456 aaPredicted RBP12.45□□□□□ -0.42
GMDS-210ENST00000533279 FBXO47Q5MNV8 452 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 ATF7IP2Q5U623 682 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 LRSAM1Q6UWE0 723 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 UBE2Q1Q7Z7E8 422 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 USP37Q86T82 979 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 SMYD4Q8IYR2 804 aaPredicted RBP12.45□□□□□ -0.42
GMDS-210ENST00000533279 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 ANKRD20A12PQ8NF67 263 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 ZNF507Q8TCN5 953 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 NELFBQ8WX92 580 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 KCNN1Q92952 543 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 HPS3Q969F9 1004 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 FTHL17Q9BXU8 183 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 IFT122Q9HBG6 1241 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 CHST12Q9NRB3 414 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 ANKFY1Q9P2R3 1169 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 TBX21Q9UL17 535 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 MAPK8IP1Q9UQF2 711 aa12.45□□□□□ -0.42
GMDS-210ENST00000533279 TRIP12Q14669 1992 aaPredicted RBP12.45□□□□□ -0.42
GMDS-210ENST00000533279 ADGRA3Q8IWK6 1321 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 GOLGA6L19H0YKK7 550 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 PDXKO00764 312 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 KIAA0355O15063 1070 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 CETN3O15182 167 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 TOM1L1O75674 476 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 LDHAP00338 332 aaKnown RBP12.44□□□□□ -0.42
GMDS-210ENST00000533279 TIMP1P01033 207 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 CHRNA1P02708 482 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 TPM2P07951 284 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 ACTN1P12814 892 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 CCNE1P24864 410 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 RAB27AP51159 221 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 PPIGQ13427 754 aaKnown RBP eCLIP12.44□□□□□ -0.42
GMDS-210ENST00000533279 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.42
GMDS-210ENST00000533279 DPCR1Q3MIW9 517 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 ANO6Q4KMQ2 910 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
GMDS-210ENST00000533279 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
GMDS-210ENST00000533279 FAM114A1Q8IWE2 563 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
GMDS-210ENST00000533279 SCFD1Q8WVM8 642 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 POMGNT1Q8WZA1 660 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 P2RX5Q93086 422 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 IFIH1Q9BYX4 1025 aaKnown RBP12.44□□□□□ -0.42
GMDS-210ENST00000533279 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 MTIF3Q9H2K0 278 aaKnown RBP12.44□□□□□ -0.42
GMDS-210ENST00000533279 FZD8Q9H461 694 aa12.44□□□□□ -0.42
GMDS-210ENST00000533279 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms