RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 KLHL11Q9NVR0 708 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 EXOC1LA0A1B0GW35 172 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 CCDC188H7C350 402 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 KCNJ1P48048 391 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 CASP4P49662 377 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 RPS6KA3P51812 740 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 C2CD6Q53TS8 623 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 SYCP2LQ5T4T6 812 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 ERICH1Q86X53 443 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 VGLL2Q8N8G2 317 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 TMEM143Q96AN5 459 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 ANKRD36BP1Q96IX9 119 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 TRIM51Q9BSJ1 452 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 RHBDL2Q9NX52 303 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 FBXL5Q9UKA1 691 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 CAPN6Q9Y6Q1 641 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 DDTLA6NHG4 134 aaPredicted RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 MAFGO15525 162 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 TTI1O43156 1089 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 CYTH3O43739 400 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 OATP04181 439 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.32
BDNF-218ENST00000533246 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 KCNJ6P48051 423 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 TTI2Q6NXR4 508 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 SRRM1Q8IYB3 904 aaKnown RBP13.08□□□□□ -0.32
BDNF-218ENST00000533246 C3orf20Q8ND61 904 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 USP32Q8NFA0 1604 aa13.08□□□□□ -0.32
BDNF-218ENST00000533246 INHBAP08476 426 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 NT5C2P49902 561 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 KCTD19Q17RG1 926 aaPredicted RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 KCTD6Q8NC69 237 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 HSPH1Q92598 858 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 FEM1BQ9UK73 627 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 PDXKO00764 312 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 MED24O75448 989 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 LUC7L3O95232 432 aaKnown RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 PYGLP06737 847 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 PPM1FP49593 454 aaPredicted RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 SNX16P57768 344 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 PDE1CQ14123 709 aaPredicted RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 CDR2LQ86X02 465 aaPredicted RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 RNPC3Q96LT9 517 aaKnown RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 SMYD2Q9NRG4 433 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 MROH1Q8NDA8 1641 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 ARHGAP42A6NI28 874 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 PIK3R2O00459 728 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 TXNDC9O14530 226 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 SOX5P35711 763 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 PDE1BQ01064 536 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 TMED1Q13445 227 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 EPHA7Q15375 998 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 DARS2Q6PI48 645 aaKnown RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 KLHL29Q96CT2 875 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 PI4K2AQ9BTU6 479 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 SEMA6BQ9H3T3 888 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 KCNQ5Q9NR82 932 aa13.07□□□□□ -0.32
BDNF-218ENST00000533246 DMGDHQ9UI17 866 aaKnown RBP13.07□□□□□ -0.32
BDNF-218ENST00000533246 SUN1O94901 812 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 CYP11B2P19099 503 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 PHBP35232 272 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 KRT39Q6A163 491 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 CCNI2Q6ZMN8 369 aaPredicted RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 RHPN2Q8IUC4 686 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 TRIM59Q8IWR1 403 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 SMC1BQ8NDV3 1235 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.06□□□□□ -0.32
BDNF-218ENST00000533246 RTFDC1Q9BY42 306 aaPredicted RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 GPRC5CQ9NQ84 441 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 KBTBD4Q9NVX7 518 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 HERC5Q9UII4 1024 aaKnown RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 SALL1Q9NSC2 1324 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 M0QZ92 97 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 WNT7AO00755 349 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 YWHABP31946 246 aaKnown RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 RCN2Q14257 317 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 STXBP2Q15833 593 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 EZH2Q15910 746 aaKnown RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 ZNF449Q6P9G9 518 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 ATL2Q8NHH9 583 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 ELMO3Q96BJ8 720 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 PAPOLBQ9NRJ5 636 aaKnown RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 NYAP2Q9P242 653 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms