RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 ITGA4P13612 1032 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
PUF60-221ENST00000533162 SCP2P22307 547 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 HOXA11P31270 313 aaPredicted RBP16.43■□□□□ 0.22
PUF60-221ENST00000533162 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
PUF60-221ENST00000533162 ALDH7A1P49419 539 aaKnown RBP16.43■□□□□ 0.22
PUF60-221ENST00000533162 UBE3AQ05086 875 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 FAM173BQ6P4H8 233 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 MRPL10Q7Z7H8 261 aaKnown RBP16.43■□□□□ 0.22
PUF60-221ENST00000533162 THNSL1Q8IYQ7 743 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 HELQQ8TDG4 1101 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 FAM193BQ96PV7 902 aaPredicted RBP16.43■□□□□ 0.22
PUF60-221ENST00000533162 USP28Q96RU2 1077 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 FZD8Q9H461 694 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 KMT5AQ9NQR1 393 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 LARSQ9P2J5 1176 aaKnown RBP16.43■□□□□ 0.22
PUF60-221ENST00000533162 ATP6V1DQ9Y5K8 247 aa16.43■□□□□ 0.22
PUF60-221ENST00000533162 A0A1B0GUA9 196 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 RBAK-RBAKDNI3L0D1 243 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 ACKR2O00590 384 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 SPTLC2O15270 562 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 NCK2O43639 380 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 LPXNO60711 386 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 PPP6R2O75170 966 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 YEATS4O95619 227 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 PRKCBP05771 671 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 ARF4P18085 180 aaPredicted RBP16.42■□□□□ 0.22
PUF60-221ENST00000533162 LIG1P18858 919 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 ABCD1P33897 745 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 DDIT3P35638 169 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 GATMP50440 423 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 SLC12A3P55017 1021 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 PEX3P56589 373 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 AAK1Q2M2I8 961 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 NOMO2Q5JPE7 1267 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 FOXD4L5Q5VV16 416 aaPredicted RBP16.42■□□□□ 0.22
PUF60-221ENST00000533162 RRAGBQ5VZM2 374 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 SPRED2Q7Z698 418 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 COLGALT1Q8NBJ5 622 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 KCNG4Q8TDN1 519 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 FOXD4L4Q8WXT5 416 aaPredicted RBP16.42■□□□□ 0.22
PUF60-221ENST00000533162 CPB2Q96IY4 423 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 TMEM134Q9H6X4 195 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 RSAD1Q9HA92 442 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 STK17AQ9UEE5 414 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 STK39Q9UEW8 545 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 FBXO2Q9UK22 296 aaPredicted RBP16.42■□□□□ 0.22
PUF60-221ENST00000533162 ODF2LQ9ULJ1 636 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 COG5Q9UP83 839 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 PLAGL2Q9UPG8 496 aa16.42■□□□□ 0.22
PUF60-221ENST00000533162 PTPRSQ13332 1948 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 NR1I2O75469 434 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 PLS3P13797 630 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 PLCG1P19174 1290 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 STRN3Q13033 797 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 KARSQ15046 597 aaKnown RBP16.41■□□□□ 0.22
PUF60-221ENST00000533162 AMHR2Q16671 573 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
PUF60-221ENST00000533162 KCNK18Q7Z418 384 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.41■□□□□ 0.22
PUF60-221ENST00000533162 KLHL23Q8NBE8 558 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 LINC00301Q8NCQ3 95 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 LARP4BQ92615 738 aaKnown RBP16.41■□□□□ 0.22
PUF60-221ENST00000533162 RAD54LQ92698 747 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
PUF60-221ENST00000533162 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 NSUN3Q9H649 340 aaKnown RBP16.41■□□□□ 0.22
PUF60-221ENST00000533162 INPP5FQ9Y2H2 1132 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 GIT1Q9Y2X7 761 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 CHD9Q3L8U1 2897 aa16.41■□□□□ 0.22
PUF60-221ENST00000533162 TBCAO75347 108 aaKnown RBP16.4■□□□□ 0.22
PUF60-221ENST00000533162 OFD1O75665 1012 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 ATF7P17544 494 aaPredicted RBP16.4■□□□□ 0.22
PUF60-221ENST00000533162 NPTX2P47972 431 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
PUF60-221ENST00000533162 DCAF4L1Q3SXM0 396 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 LONRF3Q496Y0 759 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 UBXN11Q5T124 520 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 KCNT2Q6UVM3 1135 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 GPBP1Q86WP2 473 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 SPIRE2Q8WWL2 714 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 ATXN2LQ8WWM7 1075 aaKnown RBP16.4■□□□□ 0.22
PUF60-221ENST00000533162 BSNDQ8WZ55 320 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 LPPQ93052 612 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 EPSTI1Q96J88 318 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 NTPCRQ9BSD7 190 aaKnown RBP16.4■□□□□ 0.22
PUF60-221ENST00000533162 LRRC27Q9C0I9 530 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 CWH43Q9H720 699 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 SPG21Q9NZD8 308 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
PUF60-221ENST00000533162 LZTS1Q9Y250 596 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 IPPQ9Y573 584 aa16.4■□□□□ 0.22
PUF60-221ENST00000533162 LOXHD1Q8IVV2 1947 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 FSD2A1L4K1 749 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 FGF18O76093 207 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 FAM13AO94988 1023 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 NPTXRO95502 500 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms