RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 CHRNA3P32297 505 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 SHMT1P34896 483 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 HOXD13P35453 343 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 ALDH5A1P51649 535 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-224ENST00000533129 KCNJ2P63252 427 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 SEMA4AQ9H3S1 761 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 ECT2Q9H8V3 914 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 FAM198AQ9UFP1 575 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 SYNGAP1Q96PV0 1343 aa15.94■□□□□ 0.14
CAPN1-224ENST00000533129 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-224ENST00000533129 COL4A5P29400 1685 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 COPB2P35606 906 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 SOX5P35711 763 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 GRIK3Q13003 919 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 BMT2Q1RMZ1 405 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 TCERG1LQ5VWI1 586 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 NIM1KQ8IY84 436 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 EPS8L3Q8TE67 593 aaKnown RBP15.93■□□□□ 0.14
CAPN1-224ENST00000533129 HOMER3Q9NSC5 361 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 TYW1Q9NV66 732 aaKnown RBP15.93■□□□□ 0.14
CAPN1-224ENST00000533129 MTMR4Q9NYA4 1195 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 PCYOX1Q9UHG3 505 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 ZNRF3Q9ULT6 936 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 IGSF9BQ9UPX0 1349 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 O00370 1275 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 RASGRF2O14827 1237 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 ENTPD3O75355 529 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 SUN1O94901 812 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 NR3C1P04150 777 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 AKR1B1P15121 316 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 IFNAR2P48551 515 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 BNIP1Q12981 228 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 AUHQ13825 339 aaKnown RBP15.93■□□□□ 0.14
CAPN1-224ENST00000533129 GJB7Q6PEY0 223 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 ADAT2Q7Z6V5 191 aaKnown RBP15.93■□□□□ 0.14
CAPN1-224ENST00000533129 GLYCTKQ8IVS8 523 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 CCDC17Q96LX7 622 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 PLCD4Q9BRC7 762 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 SYT11Q9BT88 431 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 PI4KBQ9UBF8 816 aa15.93■□□□□ 0.14
CAPN1-224ENST00000533129 PNMA6FA0A0J9YX94 578 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 RIPK2O43353 540 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 SNHG28P0DPA3 235 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 CACNB3P54284 484 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 COPS2P61201 443 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 GIT2Q14161 759 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 IFT74Q96LB3 600 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ZNF570Q96NI8 536 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 GMLQ99445 158 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ROPN1BQ9BZX4 212 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ROPN1Q9HAT0 212 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ASTN1O14525 1302 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 IGF2BP3O00425 579 aaKnown RBP eCLIP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 RAD17O75943 681 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 RARGP13631 454 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 KRT13P13646 458 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 RPL21P46778 160 aaKnown RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 SF3A3Q12874 501 aaKnown RBP eCLIP15.92■□□□□ 0.148e-10■■■■□ 21.2
CAPN1-224ENST00000533129 R3HDM1Q15032 1099 aaKnown RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ZFPM1Q8IX07 1006 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 RUNDC3BQ96NL0 473 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 SLC24A3Q9HC58 644 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ATRNL1Q5VV63 1379 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 LIN7AO14910 233 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 MED24O75448 989 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 HADHBP55084 474 aaKnown RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 TCP10Q12799 353 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ZNF211Q13398 564 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 SFR1Q86XK3 245 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ALG3Q92685 438 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 C18orf8Q96DM3 657 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 STK33Q9BYT3 514 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 TDRD3Q9H7E2 651 aaKnown RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 ARHGEF3Q9NR81 526 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 PCDHA3Q9Y5H8 950 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 CD2APQ9Y5K6 639 aa15.92■□□□□ 0.14
CAPN1-224ENST00000533129 BRCA1P38398 1863 aaKnown RBP15.92■□□□□ 0.14
CAPN1-224ENST00000533129 MIF4GDA9UHW6 222 aaKnown RBP15.91■□□□□ 0.14
CAPN1-224ENST00000533129 CTNNA2P26232 953 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 SLC5A4Q9NY91 659 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 GREB1LQ9C091 1923 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-224ENST00000533129 GJB6O95452 261 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 GGPS1O95749 300 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 TTLL1O95922 423 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 ALAS1P13196 640 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 ABCB4P21439 1286 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 OGFOD1Q8N543 542 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 PRELID2Q8N945 189 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 AGBL3Q8NEM8 1001 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 DYDC1Q8WWB3 177 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 ARHGEF26Q96DR7 871 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 PRMT6Q96LA8 375 aaPredicted RBP15.91■□□□□ 0.14
CAPN1-224ENST00000533129 JMJD4Q9H9V9 463 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 TMOD2Q9NZR1 351 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
CAPN1-224ENST00000533129 POTEFA5A3E0 1075 aa15.9■□□□□ 0.14
CAPN1-224ENST00000533129 ANKRD62A6NC57 917 aa15.9■□□□□ 0.14
CAPN1-224ENST00000533129 DDTLA6NHG4 134 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms